Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Col6a4A2AX52 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
Col6a4A2AX52 Gm44860-201ENSMUST00000208473 2346 ntBASIC2.94□□□□□ -1.94
Col6a4A2AX52 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Col6a4A2AX52 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Col6a4A2AX52 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Col6a4A2AX52 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
Col6a4A2AX52 Gm43065-201ENSMUST00000198971 2092 ntBASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm38374-201ENSMUST00000194417 2033 ntBASIC2.93□□□□□ -1.94
Col6a4A2AX52 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm11970-201ENSMUST00000116105 320 ntBASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm23773-201ENSMUST00000158985 296 ntBASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm23775-201ENSMUST00000158991 249 ntBASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm16134-201ENSMUST00000161714 336 ntBASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm24019-201ENSMUST00000178620 107 ntBASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm26243-201ENSMUST00000179260 107 ntBASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm37288-201ENSMUST00000193963 334 ntBASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm44475-201ENSMUST00000204041 424 ntBASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm7624-201ENSMUST00000209702 435 ntBASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC2.93□□□□□ -1.94
Col6a4A2AX52 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm23296-201ENSMUST00000082555 107 ntBASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm24859-201ENSMUST00000082729 107 ntBASIC2.93□□□□□ -1.94
Col6a4A2AX52 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm37814-201ENSMUST00000195820 3644 ntBASIC2.93□□□□□ -1.94
Col6a4A2AX52 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm7452-202ENSMUST00000202891 3039 ntBASIC2.93□□□□□ -1.94
Col6a4A2AX52 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Col6a4A2AX52 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col6a4A2AX52 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Col6a4A2AX52 Mir1198-201ENSMUST00000116995 121 ntBASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm13504-201ENSMUST00000117490 316 ntBASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm12005-201ENSMUST00000121451 379 ntBASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm22859-201ENSMUST00000174978 122 ntBASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm28069-201ENSMUST00000189926 214 ntBASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm37575-201ENSMUST00000195467 309 ntBASIC2.93□□□□□ -1.94
Col6a4A2AX52 AC124729.1-201ENSMUST00000225327 976 ntBASIC2.93□□□□□ -1.94
Col6a4A2AX52 Mir504-201ENSMUST00000093602 79 ntBASIC2.93□□□□□ -1.94
Col6a4A2AX52 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Col6a4A2AX52 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC2.93□□□□□ -1.94
Col6a4A2AX52 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC2.93□□□□□ -1.94
Col6a4A2AX52 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC2.93□□□□□ -1.94
Col6a4A2AX52 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Col6a4A2AX52 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm9911-201ENSMUST00000211467 2802 ntBASIC2.93□□□□□ -1.94
Col6a4A2AX52 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Col6a4A2AX52 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Col6a4A2AX52 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Col6a4A2AX52 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col6a4A2AX52 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col6a4A2AX52 Mir711-201ENSMUST00000102188 82 ntBASIC2.92□□□□□ -1.94
Col6a4A2AX52 Gm7071-201ENSMUST00000120458 462 ntBASIC2.92□□□□□ -1.94
Col6a4A2AX52 n-R5s30-201ENSMUST00000122624 122 ntBASIC2.92□□□□□ -1.94
Col6a4A2AX52 Gm24190-201ENSMUST00000157976 216 ntBASIC2.92□□□□□ -1.94
Col6a4A2AX52 Gm26215-201ENSMUST00000158584 139 ntBASIC2.92□□□□□ -1.94
Col6a4A2AX52 Ear-ps10-201ENSMUST00000161871 460 ntBASIC2.92□□□□□ -1.94
Col6a4A2AX52 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC2.92□□□□□ -1.94
Col6a4A2AX52 Gm37966-201ENSMUST00000193122 326 ntBASIC2.92□□□□□ -1.94
Col6a4A2AX52 Gm19366-201ENSMUST00000206996 156 ntBASIC2.92□□□□□ -1.94
Col6a4A2AX52 AC153924.1-201ENSMUST00000220117 312 ntBASIC2.92□□□□□ -1.94
Col6a4A2AX52 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC2.92□□□□□ -1.94
Col6a4A2AX52 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC2.92□□□□□ -1.94
Col6a4A2AX52 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Col6a4A2AX52 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Col6a4A2AX52 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC2.92□□□□□ -1.94
Col6a4A2AX52 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC2.92□□□□□ -1.94
Col6a4A2AX52 Gm38207-201ENSMUST00000193009 3505 ntBASIC2.92□□□□□ -1.94
Col6a4A2AX52 Gm13100-201ENSMUST00000117157 1439 ntBASIC2.92□□□□□ -1.94
Col6a4A2AX52 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
Col6a4A2AX52 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
Col6a4A2AX52 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
Col6a4A2AX52 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
Col6a4A2AX52 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
Col6a4A2AX52 Fbxw23-202ENSMUST00000198480 1388 ntBASIC2.92□□□□□ -1.94
Col6a4A2AX52 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
Col6a4A2AX52 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC2.92□□□□□ -1.94
Col6a4A2AX52 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC2.92□□□□□ -1.94
Col6a4A2AX52 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC2.92□□□□□ -1.94
Col6a4A2AX52 Gm26100-201ENSMUST00000157245 127 ntBASIC2.92□□□□□ -1.94
Col6a4A2AX52 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC2.92□□□□□ -1.94
Col6a4A2AX52 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC2.92□□□□□ -1.94
Col6a4A2AX52 Gm22908-201ENSMUST00000177620 110 ntBASIC2.92□□□□□ -1.94
Col6a4A2AX52 Gm28803-201ENSMUST00000190385 764 ntBASIC2.92□□□□□ -1.94
Col6a4A2AX52 Gm6841-201ENSMUST00000220602 598 ntBASIC2.92□□□□□ -1.94
Col6a4A2AX52 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.92□□□□□ -1.94
Col6a4A2AX52 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC2.92□□□□□ -1.94
Col6a4A2AX52 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Col6a4A2AX52 AC122840.2-201ENSMUST00000221030 2659 ntBASIC2.92□□□□□ -1.94
Col6a4A2AX52 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Col6a4A2AX52 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Col6a4A2AX52 AC153522.2-201ENSMUST00000218389 3853 ntBASIC2.92□□□□□ -1.94
Col6a4A2AX52 Gm43648-201ENSMUST00000197775 2485 ntBASIC2.92□□□□□ -1.94
Col6a4A2AX52 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Col6a4A2AX52 Gm3972-201ENSMUST00000173960 2861 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms