Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Gm21780-201ENSMUST00000180128 498 ntBASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Gm21572-201ENSMUST00000180134 498 ntBASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Gm21529-201ENSMUST00000180175 498 ntBASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Gm6055-201ENSMUST00000180532 378 ntBASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Gm29509-201ENSMUST00000185716 321 ntBASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Gm29370-202ENSMUST00000187476 499 ntBASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Gm37338-201ENSMUST00000191986 127 ntBASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Gm37358-201ENSMUST00000195492 479 ntBASIC5.64□□□□□ -1.51
Otud1Q9CUB6 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Gm6520-201ENSMUST00000200636 410 ntBASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Gm18100-201ENSMUST00000200897 452 ntBASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Gm19060-201ENSMUST00000201959 421 ntBASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC5.64□□□□□ -1.51
Otud1Q9CUB6 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Gm18413-201ENSMUST00000221573 655 ntBASIC5.64□□□□□ -1.51
Otud1Q9CUB6 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.64□□□□□ -1.51
Otud1Q9CUB6 CT030184.2-201ENSMUST00000223064 263 ntBASIC5.64□□□□□ -1.51
Otud1Q9CUB6 AC154224.1-201ENSMUST00000224367 403 ntBASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Gm5229-201ENSMUST00000039375 354 ntBASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Gm23737-201ENSMUST00000082547 159 ntBASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Gm22358-201ENSMUST00000082877 122 ntBASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Gm22974-201ENSMUST00000083301 103 ntBASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Gm25188-201ENSMUST00000083913 122 ntBASIC5.64□□□□□ -1.51
Otud1Q9CUB6 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Gm42494-201ENSMUST00000196515 3051 ntBASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Gm45160-201ENSMUST00000207112 3099 ntBASIC5.64□□□□□ -1.51
Otud1Q9CUB6 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
Otud1Q9CUB6 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 AC125532.1-201ENSMUST00000216210 2334 ntBASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Gm12080-201ENSMUST00000119821 1883 ntBASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Gm25564-201ENSMUST00000104604 132 ntBASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Gm25439-201ENSMUST00000158280 131 ntBASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Gm26022-201ENSMUST00000158663 108 ntBASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Gm9294-201ENSMUST00000165198 789 ntBASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Gm20480-201ENSMUST00000173953 250 ntBASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Mir5128-201ENSMUST00000175217 84 ntBASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Mir3066-201ENSMUST00000175296 83 ntBASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Gm27030-201ENSMUST00000182551 464 ntBASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Gm7266-201ENSMUST00000187999 405 ntBASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.63□□□□□ -1.51
Otud1Q9CUB6 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Gm22897-201ENSMUST00000197860 128 ntBASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Gm6009-201ENSMUST00000210848 280 ntBASIC5.63□□□□□ -1.51
Otud1Q9CUB6 CT485607.3-201ENSMUST00000213361 672 ntBASIC5.63□□□□□ -1.51
Otud1Q9CUB6 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Gm25081-201ENSMUST00000082534 108 ntBASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Xpo7-203ENSMUST00000226448 3663 ntBASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Otud1Q9CUB6 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Otud1Q9CUB6 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.62□□□□□ -1.51
Otud1Q9CUB6 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.62□□□□□ -1.51
Otud1Q9CUB6 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Otud1Q9CUB6 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.62□□□□□ -1.51
Otud1Q9CUB6 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Otud1Q9CUB6 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Otud1Q9CUB6 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms