Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC3.7□□□□□ -1.82
Lsm1Q8VC85 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC3.7□□□□□ -1.82
Lsm1Q8VC85 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.7□□□□□ -1.82
Lsm1Q8VC85 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.7□□□□□ -1.82
Lsm1Q8VC85 Gm26556-201ENSMUST00000180645 320 ntBASIC3.7□□□□□ -1.82
Lsm1Q8VC85 Gm38061-201ENSMUST00000192490 365 ntBASIC3.7□□□□□ -1.82
Lsm1Q8VC85 Gm44349-201ENSMUST00000197048 123 ntBASIC3.7□□□□□ -1.82
Lsm1Q8VC85 Gm43424-201ENSMUST00000200484 253 ntBASIC3.7□□□□□ -1.82
Lsm1Q8VC85 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Lsm1Q8VC85 Gm18462-201ENSMUST00000208112 417 ntBASIC3.7□□□□□ -1.82
Lsm1Q8VC85 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.7□□□□□ -1.82
Lsm1Q8VC85 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.7□□□□□ -1.82
Lsm1Q8VC85 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC3.7□□□□□ -1.82
Lsm1Q8VC85 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC3.7□□□□□ -1.82
Lsm1Q8VC85 AC158525.1-201ENSMUST00000223806 576 ntBASIC3.7□□□□□ -1.82
Lsm1Q8VC85 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC3.7□□□□□ -1.82
Lsm1Q8VC85 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC3.7□□□□□ -1.82
Lsm1Q8VC85 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Lsm1Q8VC85 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Lsm1Q8VC85 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Lsm1Q8VC85 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Gm11746-201ENSMUST00000119843 821 ntBASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Gm6079-201ENSMUST00000121356 404 ntBASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Gm25104-201ENSMUST00000122476 163 ntBASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Gm26476-201ENSMUST00000122618 313 ntBASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Gm22219-201ENSMUST00000157562 319 ntBASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Gm3851-201ENSMUST00000168653 318 ntBASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Gm25534-201ENSMUST00000175365 125 ntBASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Gm43155-201ENSMUST00000202661 494 ntBASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Gm20074-201ENSMUST00000208144 484 ntBASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Gm45434-201ENSMUST00000210550 293 ntBASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Gm45523-201ENSMUST00000210712 799 ntBASIC3.69□□□□□ -1.82
Lsm1Q8VC85 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.69□□□□□ -1.82
Lsm1Q8VC85 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.69□□□□□ -1.82
Lsm1Q8VC85 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 CT025616.1-201ENSMUST00000221158 412 ntBASIC3.69□□□□□ -1.82
Lsm1Q8VC85 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Gm23460-201ENSMUST00000083258 109 ntBASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Lsm1Q8VC85 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Gm12401-201ENSMUST00000118435 228 ntBASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Gm15157-201ENSMUST00000121852 702 ntBASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Gm11965-201ENSMUST00000122017 277 ntBASIC3.68□□□□□ -1.82
Lsm1Q8VC85 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Snora81-201ENSMUST00000157310 178 ntBASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Gm25520-201ENSMUST00000158389 118 ntBASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Mir5134-201ENSMUST00000175529 78 ntBASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Gm6625-201ENSMUST00000177870 272 ntBASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Mir6715-201ENSMUST00000184990 57 ntBASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Gm20954-201ENSMUST00000189078 644 ntBASIC3.68□□□□□ -1.82
Lsm1Q8VC85 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Gm8790-201ENSMUST00000194108 322 ntBASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Gm43704-201ENSMUST00000196164 496 ntBASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Gm18100-201ENSMUST00000200897 452 ntBASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Gm43090-201ENSMUST00000202459 314 ntBASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Gm6240-201ENSMUST00000208014 473 ntBASIC3.68□□□□□ -1.82
Lsm1Q8VC85 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 AC154241.1-201ENSMUST00000223952 356 ntBASIC3.68□□□□□ -1.82
Lsm1Q8VC85 AC131117.2-203ENSMUST00000225886 950 ntBASIC3.68□□□□□ -1.82
Lsm1Q8VC85 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lsm1Q8VC85 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms