Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm24503-201ENSMUST00000158454 135 ntBASIC5.05□□□□□ -1.6
Syne4Q8CII8 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Gm3191-201ENSMUST00000167139 346 ntBASIC5.05□□□□□ -1.6
Syne4Q8CII8 Gm6214-201ENSMUST00000178845 541 ntBASIC5.05□□□□□ -1.6
Syne4Q8CII8 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Gm24949-201ENSMUST00000183609 215 ntBASIC5.05□□□□□ -1.6
Syne4Q8CII8 Gm27695-201ENSMUST00000184301 91 ntBASIC5.05□□□□□ -1.6
Syne4Q8CII8 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Gm29428-201ENSMUST00000190086 409 ntBASIC5.05□□□□□ -1.6
Syne4Q8CII8 Gm29524-201ENSMUST00000190819 699 ntBASIC5.05□□□□□ -1.6
Syne4Q8CII8 Gm37050-201ENSMUST00000193464 466 ntBASIC5.05□□□□□ -1.6
Syne4Q8CII8 Gm36954-201ENSMUST00000195362 363 ntBASIC5.05□□□□□ -1.6
Syne4Q8CII8 Gm43582-201ENSMUST00000196149 343 ntBASIC5.05□□□□□ -1.6
Syne4Q8CII8 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Syne4Q8CII8 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Gm18645-201ENSMUST00000209593 651 ntBASIC5.05□□□□□ -1.6
Syne4Q8CII8 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC5.05□□□□□ -1.6
Syne4Q8CII8 AC153526.1-201ENSMUST00000219750 190 ntBASIC5.05□□□□□ -1.6
Syne4Q8CII8 AC159244.1-201ENSMUST00000220964 594 ntBASIC5.05□□□□□ -1.6
Syne4Q8CII8 CT030242.2-201ENSMUST00000221588 148 ntBASIC5.05□□□□□ -1.6
Syne4Q8CII8 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC5.05□□□□□ -1.6
Syne4Q8CII8 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Syne4Q8CII8 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.05□□□□□ -1.6
Syne4Q8CII8 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Gm38106-201ENSMUST00000194107 2534 ntBASIC5.05□□□□□ -1.6
Syne4Q8CII8 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Gm3675-201ENSMUST00000175904 1653 ntBASIC5.05□□□□□ -1.6
Syne4Q8CII8 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Syne4Q8CII8 Dbpht2-202ENSMUST00000221311 5341 ntBASIC5.04□□□□□ -1.6
Syne4Q8CII8 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Syne4Q8CII8 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Syne4Q8CII8 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Syne4Q8CII8 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Syne4Q8CII8 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Syne4Q8CII8 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Syne4Q8CII8 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Syne4Q8CII8 Gm23431-201ENSMUST00000104006 107 ntBASIC5.04□□□□□ -1.6
Syne4Q8CII8 Gm4596-201ENSMUST00000117197 442 ntBASIC5.04□□□□□ -1.6
Syne4Q8CII8 Gm13087-201ENSMUST00000118298 256 ntBASIC5.04□□□□□ -1.6
Syne4Q8CII8 Gm12820-201ENSMUST00000119233 342 ntBASIC5.04□□□□□ -1.6
Syne4Q8CII8 Gm5384-201ENSMUST00000120313 463 ntBASIC5.04□□□□□ -1.6
Syne4Q8CII8 Gm25104-201ENSMUST00000122476 163 ntBASIC5.04□□□□□ -1.6
Syne4Q8CII8 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC5.04□□□□□ -1.6
Syne4Q8CII8 Gm29563-201ENSMUST00000187249 496 ntBASIC5.04□□□□□ -1.6
Syne4Q8CII8 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC5.04□□□□□ -1.6
Syne4Q8CII8 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Syne4Q8CII8 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC5.04□□□□□ -1.6
Syne4Q8CII8 Gm37700-201ENSMUST00000192617 965 ntBASIC5.04□□□□□ -1.6
Syne4Q8CII8 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Syne4Q8CII8 Gm43245-201ENSMUST00000197603 468 ntBASIC5.04□□□□□ -1.6
Syne4Q8CII8 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC5.04□□□□□ -1.6
Syne4Q8CII8 Gm43384-201ENSMUST00000200569 637 ntBASIC5.04□□□□□ -1.6
Syne4Q8CII8 Gm44050-201ENSMUST00000204263 527 ntBASIC5.04□□□□□ -1.6
Syne4Q8CII8 Gm44032-201ENSMUST00000204841 166 ntBASIC5.04□□□□□ -1.6
Syne4Q8CII8 Gm44135-201ENSMUST00000205221 368 ntBASIC5.04□□□□□ -1.6
Syne4Q8CII8 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC5.04□□□□□ -1.6
Syne4Q8CII8 Gm17850-201ENSMUST00000210023 1154 ntBASIC5.04□□□□□ -1.6
Syne4Q8CII8 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC5.04□□□□□ -1.6
Syne4Q8CII8 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Syne4Q8CII8 AC126275.1-201ENSMUST00000224881 446 ntBASIC5.04□□□□□ -1.6
Syne4Q8CII8 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
Syne4Q8CII8 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Syne4Q8CII8 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Syne4Q8CII8 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Syne4Q8CII8 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Syne4Q8CII8 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC5.04□□□□□ -1.6
Syne4Q8CII8 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
Syne4Q8CII8 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
Syne4Q8CII8 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Syne4Q8CII8 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Syne4Q8CII8 Gm38090-201ENSMUST00000195733 1942 ntBASIC5.03□□□□□ -1.6
Syne4Q8CII8 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Syne4Q8CII8 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Syne4Q8CII8 Gm43374-201ENSMUST00000202498 2391 ntBASIC5.03□□□□□ -1.6
Syne4Q8CII8 Mir292-201ENSMUST00000104847 82 ntBASIC5.03□□□□□ -1.6
Syne4Q8CII8 Gm25509-201ENSMUST00000116985 106 ntBASIC5.03□□□□□ -1.6
Syne4Q8CII8 Gm14927-201ENSMUST00000120283 454 ntBASIC5.03□□□□□ -1.6
Syne4Q8CII8 Gm14845-201ENSMUST00000121259 306 ntBASIC5.03□□□□□ -1.6
Syne4Q8CII8 Gm25177-201ENSMUST00000122634 117 ntBASIC5.03□□□□□ -1.6
Syne4Q8CII8 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC5.03□□□□□ -1.6
Syne4Q8CII8 Gm24505-201ENSMUST00000157682 126 ntBASIC5.03□□□□□ -1.6
Syne4Q8CII8 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 110.2 ms