Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Brf1Q8CFK2 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Brf1Q8CFK2 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Brf1Q8CFK2 Gm42946-201ENSMUST00000196108 2570 ntBASIC5.4□□□□□ -1.54
Brf1Q8CFK2 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC5.4□□□□□ -1.54
Brf1Q8CFK2 Gm23431-201ENSMUST00000104006 107 ntBASIC5.4□□□□□ -1.54
Brf1Q8CFK2 Gm14750-201ENSMUST00000118262 516 ntBASIC5.4□□□□□ -1.54
Brf1Q8CFK2 Gm12825-201ENSMUST00000120249 563 ntBASIC5.4□□□□□ -1.54
Brf1Q8CFK2 Gm12358-201ENSMUST00000121842 520 ntBASIC5.4□□□□□ -1.54
Brf1Q8CFK2 Gm12045-201ENSMUST00000122122 573 ntBASIC5.4□□□□□ -1.54
Brf1Q8CFK2 Gm23212-201ENSMUST00000122718 60 ntBASIC5.4□□□□□ -1.54
Brf1Q8CFK2 Gm25447-201ENSMUST00000158997 128 ntBASIC5.4□□□□□ -1.54
Brf1Q8CFK2 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Brf1Q8CFK2 Gm27236-201ENSMUST00000184147 442 ntBASIC5.4□□□□□ -1.54
Brf1Q8CFK2 Gm29484-201ENSMUST00000186067 324 ntBASIC5.4□□□□□ -1.54
Brf1Q8CFK2 Gm18181-201ENSMUST00000190670 736 ntBASIC5.4□□□□□ -1.54
Brf1Q8CFK2 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Brf1Q8CFK2 Gm8774-201ENSMUST00000203621 692 ntBASIC5.4□□□□□ -1.54
Brf1Q8CFK2 Gm19032-201ENSMUST00000208584 592 ntBASIC5.4□□□□□ -1.54
Brf1Q8CFK2 AC124399.1-201ENSMUST00000218334 590 ntBASIC5.4□□□□□ -1.54
Brf1Q8CFK2 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC5.4□□□□□ -1.54
Brf1Q8CFK2 AC166830.1-201ENSMUST00000224201 533 ntBASIC5.4□□□□□ -1.54
Brf1Q8CFK2 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.4□□□□□ -1.54
Brf1Q8CFK2 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Brf1Q8CFK2 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Brf1Q8CFK2 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Brf1Q8CFK2 Gm25135-201ENSMUST00000082648 143 ntBASIC5.4□□□□□ -1.54
Brf1Q8CFK2 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Brf1Q8CFK2 AC164102.1-201ENSMUST00000220524 1553 ntBASIC5.4□□□□□ -1.55
Brf1Q8CFK2 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Brf1Q8CFK2 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC5.4□□□□□ -1.55
Brf1Q8CFK2 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC5.4□□□□□ -1.55
Brf1Q8CFK2 Gm13310-201ENSMUST00000120962 1381 ntBASIC5.4□□□□□ -1.55
Brf1Q8CFK2 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
Brf1Q8CFK2 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
Brf1Q8CFK2 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Brf1Q8CFK2 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Gm3665-201ENSMUST00000177214 2461 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Gm38057-201ENSMUST00000195551 3203 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Gm11971-201ENSMUST00000117715 288 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Gm12760-201ENSMUST00000117861 482 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Gm15094-201ENSMUST00000118394 1131 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Gm15333-201ENSMUST00000118825 364 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Gm11359-201ENSMUST00000120039 567 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Snrpert-201ENSMUST00000121967 279 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Gm10059-201ENSMUST00000131139 171 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Gm23269-201ENSMUST00000178701 107 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Gm6113-201ENSMUST00000180319 639 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Mir6410-201ENSMUST00000184204 104 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Gm27538-201ENSMUST00000185065 294 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Gm2950-201ENSMUST00000185530 520 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Gm38150-201ENSMUST00000192996 452 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Gm37070-201ENSMUST00000193272 460 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC5.39□□□□□ -1.55
Brf1Q8CFK2 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Gm44254-201ENSMUST00000204184 322 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Gm44757-201ENSMUST00000206373 157 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Gm45651-201ENSMUST00000210857 335 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 AC154657.1-201ENSMUST00000226394 775 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Gm10916-201ENSMUST00000080330 483 ntBASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
Brf1Q8CFK2 Gm11251-201ENSMUST00000119593 2800 ntBASIC5.38□□□□□ -1.55
Brf1Q8CFK2 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Brf1Q8CFK2 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Brf1Q8CFK2 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC5.38□□□□□ -1.55
Brf1Q8CFK2 Gm15170-201ENSMUST00000121593 2023 ntBASIC5.38□□□□□ -1.55
Brf1Q8CFK2 AC164297.6-201ENSMUST00000224643 1568 ntBASIC5.38□□□□□ -1.55
Brf1Q8CFK2 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC5.38□□□□□ -1.55
Brf1Q8CFK2 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Brf1Q8CFK2 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Brf1Q8CFK2 Gm45160-201ENSMUST00000207112 3099 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms