Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm5252-201ENSMUST00000189030 909 ntBASIC5.29□□□□□ -1.56
Vps53Q8CCB4 Gm37979-201ENSMUST00000193065 712 ntBASIC5.29□□□□□ -1.56
Vps53Q8CCB4 Gm9560-201ENSMUST00000205012 1201 ntBASIC5.29□□□□□ -1.56
Vps53Q8CCB4 Gm44523-201ENSMUST00000205616 417 ntBASIC5.29□□□□□ -1.56
Vps53Q8CCB4 Gm17811-201ENSMUST00000206193 387 ntBASIC5.29□□□□□ -1.56
Vps53Q8CCB4 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC5.29□□□□□ -1.56
Vps53Q8CCB4 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC5.29□□□□□ -1.56
Vps53Q8CCB4 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC5.29□□□□□ -1.56
Vps53Q8CCB4 AC116726.2-201ENSMUST00000217629 986 ntBASIC5.29□□□□□ -1.56
Vps53Q8CCB4 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC5.29□□□□□ -1.56
Vps53Q8CCB4 Gm6171-201ENSMUST00000220760 645 ntBASIC5.29□□□□□ -1.56
Vps53Q8CCB4 Gm45965-201ENSMUST00000221192 1284 ntBASIC5.29□□□□□ -1.56
Vps53Q8CCB4 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC5.29□□□□□ -1.56
Vps53Q8CCB4 CT025552.2-201ENSMUST00000225497 317 ntBASIC5.29□□□□□ -1.56
Vps53Q8CCB4 AC117814.1-201ENSMUST00000226135 352 ntBASIC5.29□□□□□ -1.56
Vps53Q8CCB4 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Vps53Q8CCB4 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Vps53Q8CCB4 Gm24031-201ENSMUST00000083930 131 ntBASIC5.29□□□□□ -1.56
Vps53Q8CCB4 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Vps53Q8CCB4 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Vps53Q8CCB4 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Vps53Q8CCB4 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC5.29□□□□□ -1.56
Vps53Q8CCB4 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC5.29□□□□□ -1.56
Vps53Q8CCB4 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Vps53Q8CCB4 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
Vps53Q8CCB4 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Vps53Q8CCB4 Gm13230-201ENSMUST00000120870 1575 ntBASIC5.29□□□□□ -1.56
Vps53Q8CCB4 Gm7269-201ENSMUST00000210819 1373 ntBASIC5.29□□□□□ -1.56
Vps53Q8CCB4 Gm37461-201ENSMUST00000193929 3704 ntBASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 AC147639.2-202ENSMUST00000224834 1545 ntBASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Gm22473-201ENSMUST00000104114 132 ntBASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Gm16400-201ENSMUST00000116523 1029 ntBASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Gm23792-201ENSMUST00000122557 93 ntBASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Gm24251-201ENSMUST00000157324 114 ntBASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Gm24905-201ENSMUST00000158129 104 ntBASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Gm20428-201ENSMUST00000174365 283 ntBASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Mir6411-201ENSMUST00000183556 108 ntBASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Gm38221-201ENSMUST00000195146 365 ntBASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Gm44852-201ENSMUST00000207950 369 ntBASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Gm23464-201ENSMUST00000083145 147 ntBASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Gm45223-201ENSMUST00000207037 5138 ntBASIC5.28□□□□□ -1.56
Vps53Q8CCB4 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Gm36962-201ENSMUST00000192114 1761 ntBASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Gm42704-201ENSMUST00000196875 1778 ntBASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Gm11914-201ENSMUST00000117094 507 ntBASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Gm15126-201ENSMUST00000118631 833 ntBASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Gm14516-201ENSMUST00000120012 252 ntBASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Gm14848-201ENSMUST00000121850 467 ntBASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Gm15075-201ENSMUST00000122187 477 ntBASIC5.27□□□□□ -1.57
Vps53Q8CCB4 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC5.27□□□□□ -1.57
Vps53Q8CCB4 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Gm23465-201ENSMUST00000157134 262 ntBASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Gm26354-201ENSMUST00000158221 129 ntBASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Mir6414-201ENSMUST00000183685 82 ntBASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Gm29484-201ENSMUST00000186067 324 ntBASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Gm3145-201ENSMUST00000188584 220 ntBASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Gm29641-201ENSMUST00000188955 259 ntBASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Gm3933-201ENSMUST00000195391 439 ntBASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Gm43209-201ENSMUST00000198949 1588 ntBASIC5.27□□□□□ -1.57
Vps53Q8CCB4 Gm3189-201ENSMUST00000205595 832 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms