Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Gm9845-201ENSMUST00000056409 598 ntBASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Col6a6Q8C6K9 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Gm13443-201ENSMUST00000120770 555 ntBASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Gm23775-201ENSMUST00000158991 249 ntBASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Gm27893-201ENSMUST00000184408 194 ntBASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Mir7050-201ENSMUST00000184636 60 ntBASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Gm32340-201ENSMUST00000192883 259 ntBASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Gm43825-201ENSMUST00000199650 734 ntBASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Gm37504-201ENSMUST00000192537 2374 ntBASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Gm12873-201ENSMUST00000119988 422 ntBASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Gm26214-201ENSMUST00000158581 107 ntBASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Gm43930-201ENSMUST00000203868 845 ntBASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Gm44773-201ENSMUST00000207374 557 ntBASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.13□□□□□ -1.91
Col6a6Q8C6K9 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm26145-201ENSMUST00000104476 127 ntBASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm15180-201ENSMUST00000117745 492 ntBASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm11746-201ENSMUST00000119843 821 ntBASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm26027-201ENSMUST00000122725 268 ntBASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm24817-201ENSMUST00000093672 105 ntBASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm22472-201ENSMUST00000104115 134 ntBASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm13321-201ENSMUST00000117101 400 ntBASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm16021-201ENSMUST00000121176 219 ntBASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm27592-201ENSMUST00000157729 126 ntBASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm22174-201ENSMUST00000175050 125 ntBASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm22692-201ENSMUST00000175055 125 ntBASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm27634-201ENSMUST00000175060 126 ntBASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm26460-201ENSMUST00000175061 126 ntBASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm22460-201ENSMUST00000175269 124 ntBASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm24365-201ENSMUST00000175384 125 ntBASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm44310-201ENSMUST00000175424 126 ntBASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm22639-201ENSMUST00000175591 125 ntBASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm24979-201ENSMUST00000178626 126 ntBASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm26991-201ENSMUST00000180950 620 ntBASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm27374-201ENSMUST00000183660 81 ntBASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm27743-201ENSMUST00000185136 126 ntBASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm28924-201ENSMUST00000190012 241 ntBASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Col6a6Q8C6K9 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.11□□□□□ -1.91
Col6a6Q8C6K9 Gm12722-201ENSMUST00000118507 493 ntBASIC3.11□□□□□ -1.91
Col6a6Q8C6K9 Gm15403-201ENSMUST00000119343 1227 ntBASIC3.11□□□□□ -1.91
Col6a6Q8C6K9 Gm7071-201ENSMUST00000120458 462 ntBASIC3.11□□□□□ -1.91
Col6a6Q8C6K9 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC3.11□□□□□ -1.91
Col6a6Q8C6K9 Gm24059-201ENSMUST00000157493 312 ntBASIC3.11□□□□□ -1.91
Col6a6Q8C6K9 Gm23402-201ENSMUST00000178130 107 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 106.1 ms