Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm25295-201ENSMUST00000122794 306 ntBASIC4.95□□□□□ -1.62
Usp47Q8BY87 Gm23755-201ENSMUST00000157578 343 ntBASIC4.95□□□□□ -1.62
Usp47Q8BY87 Gm24537-201ENSMUST00000157950 102 ntBASIC4.95□□□□□ -1.62
Usp47Q8BY87 Gm24739-201ENSMUST00000158855 292 ntBASIC4.95□□□□□ -1.62
Usp47Q8BY87 Gm6264-202ENSMUST00000162896 1217 ntBASIC4.95□□□□□ -1.62
Usp47Q8BY87 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Usp47Q8BY87 Gm22910-201ENSMUST00000178568 132 ntBASIC4.95□□□□□ -1.62
Usp47Q8BY87 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Usp47Q8BY87 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Usp47Q8BY87 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.95□□□□□ -1.62
Usp47Q8BY87 BC023105-201ENSMUST00000073997 1227 ntBASIC4.95□□□□□ -1.62
Usp47Q8BY87 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.95□□□□□ -1.62
Usp47Q8BY87 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC4.95□□□□□ -1.62
Usp47Q8BY87 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Usp47Q8BY87 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Usp47Q8BY87 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Usp47Q8BY87 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC4.94□□□□□ -1.62
Usp47Q8BY87 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Usp47Q8BY87 Gm12982-201ENSMUST00000117408 190 ntBASIC4.94□□□□□ -1.62
Usp47Q8BY87 Gm11896-201ENSMUST00000121105 820 ntBASIC4.94□□□□□ -1.62
Usp47Q8BY87 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC4.94□□□□□ -1.62
Usp47Q8BY87 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC4.94□□□□□ -1.62
Usp47Q8BY87 Gm6947-201ENSMUST00000186254 78 ntBASIC4.94□□□□□ -1.62
Usp47Q8BY87 Gm29064-201ENSMUST00000187014 813 ntBASIC4.94□□□□□ -1.62
Usp47Q8BY87 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.94□□□□□ -1.62
Usp47Q8BY87 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Usp47Q8BY87 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Usp47Q8BY87 Gm39147-201ENSMUST00000211376 465 ntBASIC4.94□□□□□ -1.62
Usp47Q8BY87 AC142499.1-201ENSMUST00000220036 374 ntBASIC4.94□□□□□ -1.62
Usp47Q8BY87 Gm18387-201ENSMUST00000220333 702 ntBASIC4.94□□□□□ -1.62
Usp47Q8BY87 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Usp47Q8BY87 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Usp47Q8BY87 Gm6195-201ENSMUST00000063059 357 ntBASIC4.94□□□□□ -1.62
Usp47Q8BY87 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Usp47Q8BY87 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Usp47Q8BY87 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Usp47Q8BY87 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Usp47Q8BY87 Gm18594-201ENSMUST00000175733 1403 ntBASIC4.94□□□□□ -1.62
Usp47Q8BY87 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Usp47Q8BY87 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
Usp47Q8BY87 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Usp47Q8BY87 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Usp47Q8BY87 Gm23530-201ENSMUST00000104564 137 ntBASIC4.93□□□□□ -1.62
Usp47Q8BY87 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Usp47Q8BY87 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Usp47Q8BY87 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Usp47Q8BY87 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Usp47Q8BY87 Gm10237-201ENSMUST00000078393 273 ntBASIC4.93□□□□□ -1.62
Usp47Q8BY87 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Usp47Q8BY87 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.93□□□□□ -1.62
Usp47Q8BY87 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Usp47Q8BY87 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Usp47Q8BY87 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
Usp47Q8BY87 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Usp47Q8BY87 AC124586.1-201ENSMUST00000221673 2795 ntBASIC4.93□□□□□ -1.62
Usp47Q8BY87 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Usp47Q8BY87 Gm12025-201ENSMUST00000117768 144 ntBASIC4.92□□□□□ -1.62
Usp47Q8BY87 Gm14681-201ENSMUST00000118047 411 ntBASIC4.92□□□□□ -1.62
Usp47Q8BY87 Gm13692-201ENSMUST00000120774 371 ntBASIC4.92□□□□□ -1.62
Usp47Q8BY87 Gm22718-201ENSMUST00000122701 315 ntBASIC4.92□□□□□ -1.62
Usp47Q8BY87 Gm25438-201ENSMUST00000158281 110 ntBASIC4.92□□□□□ -1.62
Usp47Q8BY87 Gm28030-201ENSMUST00000184987 138 ntBASIC4.92□□□□□ -1.62
Usp47Q8BY87 Gm28591-201ENSMUST00000185259 183 ntBASIC4.92□□□□□ -1.62
Usp47Q8BY87 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC4.92□□□□□ -1.62
Usp47Q8BY87 Gm20997-201ENSMUST00000205148 231 ntBASIC4.92□□□□□ -1.62
Usp47Q8BY87 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC4.92□□□□□ -1.62
Usp47Q8BY87 Gm18597-201ENSMUST00000209519 694 ntBASIC4.92□□□□□ -1.62
Usp47Q8BY87 AC155923.1-201ENSMUST00000215676 356 ntBASIC4.92□□□□□ -1.62
Usp47Q8BY87 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Usp47Q8BY87 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Usp47Q8BY87 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Usp47Q8BY87 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Usp47Q8BY87 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Usp47Q8BY87 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Usp47Q8BY87 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Usp47Q8BY87 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Usp47Q8BY87 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Usp47Q8BY87 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Usp47Q8BY87 Gm44220-201ENSMUST00000203784 2487 ntBASIC4.92□□□□□ -1.62
Usp47Q8BY87 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Usp47Q8BY87 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Usp47Q8BY87 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Usp47Q8BY87 Gm14875-201ENSMUST00000120881 319 ntBASIC4.91□□□□□ -1.62
Usp47Q8BY87 Gm15142-201ENSMUST00000121013 856 ntBASIC4.91□□□□□ -1.62
Usp47Q8BY87 Gm14776-201ENSMUST00000121029 887 ntBASIC4.91□□□□□ -1.62
Usp47Q8BY87 Klra11-ps-201ENSMUST00000122033 810 ntBASIC4.91□□□□□ -1.62
Usp47Q8BY87 Gm4207-201ENSMUST00000173144 960 ntBASIC4.91□□□□□ -1.62
Usp47Q8BY87 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Usp47Q8BY87 Gm9775-201ENSMUST00000189402 331 ntBASIC4.91□□□□□ -1.62
Usp47Q8BY87 Gm37996-201ENSMUST00000191859 367 ntBASIC4.91□□□□□ -1.62
Usp47Q8BY87 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Usp47Q8BY87 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Usp47Q8BY87 AC140368.1-202ENSMUST00000226131 658 ntBASIC4.91□□□□□ -1.62
Usp47Q8BY87 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Usp47Q8BY87 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.91□□□□□ -1.62
Usp47Q8BY87 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Usp47Q8BY87 Gm38699-201ENSMUST00000221301 1740 ntBASIC4.91□□□□□ -1.62
Usp47Q8BY87 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Usp47Q8BY87 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Usp47Q8BY87 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms