Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.56□□□□□ -1.52
Sh3rf1Q69ZI1 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm25213-201ENSMUST00000102388 113 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Mir466i-201ENSMUST00000116924 121 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm5381-201ENSMUST00000117975 1250 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm15382-201ENSMUST00000118011 537 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm14655-201ENSMUST00000120124 578 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm25784-201ENSMUST00000122524 81 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm22529-201ENSMUST00000158817 123 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm6632-201ENSMUST00000168425 954 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Mir5112-201ENSMUST00000174897 60 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm27676-201ENSMUST00000183669 61 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm10105-201ENSMUST00000184601 270 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm27679-201ENSMUST00000184612 84 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm37681-201ENSMUST00000193880 727 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm42539-201ENSMUST00000197009 308 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm43142-201ENSMUST00000198670 361 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm18194-201ENSMUST00000210455 481 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 AC138290.2-201ENSMUST00000218822 369 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 AC166341.3-201ENSMUST00000221861 114 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 CT025689.4-201ENSMUST00000225926 601 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 AV026068-237ENSMUST00000226075 572 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm23330-201ENSMUST00000082660 164 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm25682-201ENSMUST00000083942 164 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.55□□□□□ -1.52
Sh3rf1Q69ZI1 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm43718-201ENSMUST00000197524 1857 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm24338-201ENSMUST00000104205 127 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm13082-201ENSMUST00000118877 561 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm22596-201ENSMUST00000157601 316 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm4617-201ENSMUST00000178993 331 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm27355-201ENSMUST00000185045 128 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm29086-201ENSMUST00000186774 222 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm29085-201ENSMUST00000187108 225 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm36999-201ENSMUST00000192756 1046 ntBASIC5.54□□□□□ -1.52
Sh3rf1Q69ZI1 Gm42832-201ENSMUST00000196361 745 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms