Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm13755-201ENSMUST00000118509 305 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 Gm15553-201ENSMUST00000118757 430 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 Gm12044-201ENSMUST00000120335 213 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Trim28Q62318 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim28Q62318 Gm5963-201ENSMUST00000143451 236 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trim28Q62318 Gm22794-201ENSMUST00000157228 306 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 Gm23905-201ENSMUST00000157568 109 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 Gm22080-201ENSMUST00000157591 106 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 Gm25908-201ENSMUST00000157624 98 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 Gm17177-201ENSMUST00000169144 483 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim28Q62318 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Trim28Q62318 Gm27976-201ENSMUST00000183635 162 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 Gm28967-201ENSMUST00000187351 281 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 Gm38270-201ENSMUST00000192721 407 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim28Q62318 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim28Q62318 Gm43295-201ENSMUST00000201439 412 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 Gm44404-201ENSMUST00000203979 636 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 Gm17780-201ENSMUST00000207142 612 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 Gm6230-201ENSMUST00000208077 780 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 Gm45658-201ENSMUST00000209197 580 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim28Q62318 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 AC122301.1-201ENSMUST00000219625 507 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 AC154329.2-201ENSMUST00000225257 383 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 AC154371.1-201ENSMUST00000226600 412 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 AC150560.2-201ENSMUST00000227208 171 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 CT030238.4-201ENSMUST00000228579 801 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim28Q62318 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim28Q62318 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Trim28Q62318 Gm43329-201ENSMUST00000200120 3232 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Trim28Q62318 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Trim28Q62318 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Trim28Q62318 Gm43871-201ENSMUST00000204931 1955 ntBASIC5.71□□□□□ -1.5
Trim28Q62318 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trim28Q62318 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Trim28Q62318 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trim28Q62318 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.7□□□□□ -1.5
Trim28Q62318 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trim28Q62318 Gm11905-201ENSMUST00000117653 678 ntBASIC5.7□□□□□ -1.5
Trim28Q62318 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim28Q62318 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC5.7□□□□□ -1.5
Trim28Q62318 Gm12294-201ENSMUST00000119723 490 ntBASIC5.7□□□□□ -1.5
Trim28Q62318 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC5.7□□□□□ -1.5
Trim28Q62318 Gm11761-201ENSMUST00000121392 445 ntBASIC5.7□□□□□ -1.5
Trim28Q62318 Gm11506-201ENSMUST00000122414 470 ntBASIC5.7□□□□□ -1.5
Trim28Q62318 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.7□□□□□ -1.5
Trim28Q62318 Gm15508-201ENSMUST00000160330 325 ntBASIC5.7□□□□□ -1.5
Trim28Q62318 Gm17109-201ENSMUST00000163985 358 ntBASIC5.7□□□□□ -1.5
Trim28Q62318 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC5.7□□□□□ -1.5
Trim28Q62318 Gm17085-201ENSMUST00000165425 502 ntBASIC5.7□□□□□ -1.5
Trim28Q62318 Mir5134-201ENSMUST00000175529 78 ntBASIC5.7□□□□□ -1.5
Trim28Q62318 Gm18417-201ENSMUST00000176564 648 ntBASIC5.7□□□□□ -1.5
Trim28Q62318 Gm7654-201ENSMUST00000186738 683 ntBASIC5.7□□□□□ -1.5
Trim28Q62318 Gm9443-201ENSMUST00000188406 816 ntBASIC5.7□□□□□ -1.5
Trim28Q62318 Gm29641-201ENSMUST00000188955 259 ntBASIC5.7□□□□□ -1.5
Trim28Q62318 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC5.7□□□□□ -1.5
Trim28Q62318 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC5.7□□□□□ -1.5
Trim28Q62318 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC5.7□□□□□ -1.5
Trim28Q62318 Gm20997-201ENSMUST00000205148 231 ntBASIC5.7□□□□□ -1.5
Trim28Q62318 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Trim28Q62318 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC5.7□□□□□ -1.5
Trim28Q62318 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC5.7□□□□□ -1.5
Trim28Q62318 AC239878.2-201ENSMUST00000224048 464 ntBASIC5.7□□□□□ -1.5
Trim28Q62318 CT025525.3-201ENSMUST00000228858 366 ntBASIC5.7□□□□□ -1.5
Trim28Q62318 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Trim28Q62318 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Trim28Q62318 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Trim28Q62318 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.7□□□□□ -1.5
Trim28Q62318 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC5.7□□□□□ -1.5
Trim28Q62318 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim28Q62318 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trim28Q62318 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trim28Q62318 Gm45517-201ENSMUST00000209973 2468 ntBASIC5.69□□□□□ -1.5
Trim28Q62318 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim28Q62318 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim28Q62318 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Trim28Q62318 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Trim28Q62318 Gm14879-201ENSMUST00000117308 507 ntBASIC5.69□□□□□ -1.5
Trim28Q62318 Gm13574-201ENSMUST00000120482 394 ntBASIC5.69□□□□□ -1.5
Trim28Q62318 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC5.69□□□□□ -1.5
Trim28Q62318 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim28Q62318 Gm26468-201ENSMUST00000158644 106 ntBASIC5.69□□□□□ -1.5
Trim28Q62318 Gm27695-201ENSMUST00000184301 91 ntBASIC5.69□□□□□ -1.5
Trim28Q62318 Gm29428-201ENSMUST00000190086 409 ntBASIC5.69□□□□□ -1.5
Trim28Q62318 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC5.69□□□□□ -1.5
Trim28Q62318 Gm38109-201ENSMUST00000195386 181 ntBASIC5.69□□□□□ -1.5
Trim28Q62318 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC5.69□□□□□ -1.5
Trim28Q62318 Gm9245-201ENSMUST00000200528 983 ntBASIC5.69□□□□□ -1.5
Trim28Q62318 Gm44023-201ENSMUST00000203710 469 ntBASIC5.69□□□□□ -1.5
Trim28Q62318 Gm44650-201ENSMUST00000206929 194 ntBASIC5.69□□□□□ -1.5
Trim28Q62318 Gm29817-201ENSMUST00000210098 172 ntBASIC5.69□□□□□ -1.5
Trim28Q62318 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Trim28Q62318 AC156504.1-201ENSMUST00000214608 157 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms