Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC3.25□□□□□ -1.89
VcanQ62059 Gm23123-201ENSMUST00000157648 144 ntBASIC3.25□□□□□ -1.89
VcanQ62059 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
VcanQ62059 Gm28900-201ENSMUST00000185232 156 ntBASIC3.25□□□□□ -1.89
VcanQ62059 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.25□□□□□ -1.89
VcanQ62059 Gm9251-201ENSMUST00000197202 628 ntBASIC3.25□□□□□ -1.89
VcanQ62059 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.25□□□□□ -1.89
VcanQ62059 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC3.25□□□□□ -1.89
VcanQ62059 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
VcanQ62059 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VcanQ62059 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VcanQ62059 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VcanQ62059 Gm25377-201ENSMUST00000104334 129 ntBASIC3.24□□□□□ -1.89
VcanQ62059 Gm4914-201ENSMUST00000119757 459 ntBASIC3.24□□□□□ -1.89
VcanQ62059 Gm20162-201ENSMUST00000193629 871 ntBASIC3.24□□□□□ -1.89
VcanQ62059 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC3.24□□□□□ -1.89
VcanQ62059 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
VcanQ62059 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.24□□□□□ -1.89
VcanQ62059 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VcanQ62059 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VcanQ62059 AC153881.3-201ENSMUST00000218494 1561 ntBASIC3.24□□□□□ -1.89
VcanQ62059 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
VcanQ62059 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.24□□□□□ -1.89
VcanQ62059 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC3.24□□□□□ -1.89
VcanQ62059 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.24□□□□□ -1.89
VcanQ62059 Gm18000-201ENSMUST00000212153 800 ntBASIC3.24□□□□□ -1.89
VcanQ62059 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
VcanQ62059 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
VcanQ62059 Gm13310-201ENSMUST00000120962 1381 ntBASIC3.24□□□□□ -1.89
VcanQ62059 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
VcanQ62059 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
VcanQ62059 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VcanQ62059 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
VcanQ62059 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC3.24□□□□□ -1.89
VcanQ62059 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.24□□□□□ -1.89
VcanQ62059 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC3.23□□□□□ -1.89
VcanQ62059 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VcanQ62059 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VcanQ62059 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
VcanQ62059 Gm13167-201ENSMUST00000118554 578 ntBASIC3.23□□□□□ -1.89
VcanQ62059 Gm11456-201ENSMUST00000121070 256 ntBASIC3.23□□□□□ -1.89
VcanQ62059 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
VcanQ62059 Gm17187-201ENSMUST00000164622 410 ntBASIC3.23□□□□□ -1.89
VcanQ62059 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.23□□□□□ -1.89
VcanQ62059 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
VcanQ62059 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
VcanQ62059 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.23□□□□□ -1.89
VcanQ62059 CT030662.2-201ENSMUST00000226942 805 ntBASIC3.23□□□□□ -1.89
VcanQ62059 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
VcanQ62059 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.23□□□□□ -1.89
VcanQ62059 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VcanQ62059 Gm43473-201ENSMUST00000200442 5997 ntBASIC3.23□□□□□ -1.89
VcanQ62059 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
VcanQ62059 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
VcanQ62059 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
VcanQ62059 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
VcanQ62059 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
VcanQ62059 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VcanQ62059 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.23□□□□□ -1.89
VcanQ62059 Gm42611-201ENSMUST00000199446 3407 ntBASIC3.23□□□□□ -1.89
VcanQ62059 Gm15166-201ENSMUST00000120790 385 ntBASIC3.23□□□□□ -1.89
VcanQ62059 Gm14581-201ENSMUST00000121726 198 ntBASIC3.23□□□□□ -1.89
VcanQ62059 Gm2892-201ENSMUST00000145537 711 ntBASIC3.23□□□□□ -1.89
VcanQ62059 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
VcanQ62059 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
VcanQ62059 Stk-ps2-204ENSMUST00000187808 616 ntBASIC3.23□□□□□ -1.89
VcanQ62059 Gm29038-201ENSMUST00000191543 678 ntBASIC3.23□□□□□ -1.89
VcanQ62059 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC3.23□□□□□ -1.89
VcanQ62059 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
VcanQ62059 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VcanQ62059 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
VcanQ62059 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
VcanQ62059 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VcanQ62059 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VcanQ62059 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VcanQ62059 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.22□□□□□ -1.89
VcanQ62059 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.22□□□□□ -1.89
VcanQ62059 Gm14901-201ENSMUST00000119001 283 ntBASIC3.22□□□□□ -1.89
VcanQ62059 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC3.22□□□□□ -1.89
VcanQ62059 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
VcanQ62059 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
VcanQ62059 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
VcanQ62059 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
VcanQ62059 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VcanQ62059 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
VcanQ62059 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
VcanQ62059 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
VcanQ62059 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
VcanQ62059 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VcanQ62059 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VcanQ62059 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC3.22□□□□□ -1.89
VcanQ62059 Gm44523-201ENSMUST00000205616 417 ntBASIC3.22□□□□□ -1.89
VcanQ62059 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
VcanQ62059 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
VcanQ62059 Gm38264-201ENSMUST00000194850 2032 ntBASIC3.22□□□□□ -1.89
VcanQ62059 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
VcanQ62059 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
VcanQ62059 Gm14518-201ENSMUST00000117351 542 ntBASIC3.21□□□□□ -1.89
VcanQ62059 Gm12722-201ENSMUST00000118507 493 ntBASIC3.21□□□□□ -1.89
VcanQ62059 Gm11746-201ENSMUST00000119843 821 ntBASIC3.21□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms