Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 AC117237.1-201ENSMUST00000224035 395 ntBASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 AC102815.1-201ENSMUST00000226662 1061 ntBASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Gm3089-201ENSMUST00000200804 1395 ntBASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Gm3302-201ENSMUST00000201462 1395 ntBASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Gm44164-201ENSMUST00000203605 2561 ntBASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Gm43009-201ENSMUST00000199979 3566 ntBASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ccdc88bQ4QRL3 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Ccdc88bQ4QRL3 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC5.84□□□□□ -1.47
Ccdc88bQ4QRL3 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Ccdc88bQ4QRL3 Gm5058-201ENSMUST00000187331 463 ntBASIC5.84□□□□□ -1.47
Ccdc88bQ4QRL3 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC5.84□□□□□ -1.47
Ccdc88bQ4QRL3 Gm43930-201ENSMUST00000203868 845 ntBASIC5.84□□□□□ -1.47
Ccdc88bQ4QRL3 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.84□□□□□ -1.47
Ccdc88bQ4QRL3 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Ccdc88bQ4QRL3 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc88bQ4QRL3 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ccdc88bQ4QRL3 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Gm25308-201ENSMUST00000104171 158 ntBASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Gm29064-201ENSMUST00000187014 813 ntBASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Gm28803-201ENSMUST00000190385 764 ntBASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Gm37698-201ENSMUST00000192605 463 ntBASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Gm43717-201ENSMUST00000198684 310 ntBASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Gm44084-201ENSMUST00000203947 409 ntBASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Gm45006-201ENSMUST00000206078 690 ntBASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Gm22155-201ENSMUST00000083836 162 ntBASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Gm23530-201ENSMUST00000104564 137 ntBASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Gm43276-201ENSMUST00000199712 364 ntBASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 AC129219.3-201ENSMUST00000223790 196 ntBASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Gm37814-201ENSMUST00000195820 3644 ntBASIC5.83□□□□□ -1.48
Ccdc88bQ4QRL3 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Ccdc88bQ4QRL3 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc88bQ4QRL3 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.82□□□□□ -1.48
Ccdc88bQ4QRL3 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.82□□□□□ -1.48
Ccdc88bQ4QRL3 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc88bQ4QRL3 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc88bQ4QRL3 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.82□□□□□ -1.48
Ccdc88bQ4QRL3 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.82□□□□□ -1.48
Ccdc88bQ4QRL3 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Ccdc88bQ4QRL3 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Ccdc88bQ4QRL3 Gm15021-201ENSMUST00000117832 742 ntBASIC5.82□□□□□ -1.48
Ccdc88bQ4QRL3 Gm14586-201ENSMUST00000119571 408 ntBASIC5.82□□□□□ -1.48
Ccdc88bQ4QRL3 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc88bQ4QRL3 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
Ccdc88bQ4QRL3 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC5.82□□□□□ -1.48
Ccdc88bQ4QRL3 Gm22910-201ENSMUST00000178568 132 ntBASIC5.82□□□□□ -1.48
Ccdc88bQ4QRL3 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc88bQ4QRL3 Gm37701-201ENSMUST00000192947 1100 ntBASIC5.82□□□□□ -1.48
Ccdc88bQ4QRL3 Gm43825-201ENSMUST00000199650 734 ntBASIC5.82□□□□□ -1.48
Ccdc88bQ4QRL3 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Ccdc88bQ4QRL3 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Ccdc88bQ4QRL3 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC5.81□□□□□ -1.48
Ccdc88bQ4QRL3 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc88bQ4QRL3 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc88bQ4QRL3 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ccdc88bQ4QRL3 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Ccdc88bQ4QRL3 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ccdc88bQ4QRL3 Gm16327-201ENSMUST00000137146 228 ntBASIC5.81□□□□□ -1.48
Ccdc88bQ4QRL3 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc88bQ4QRL3 Gm24537-201ENSMUST00000157950 102 ntBASIC5.81□□□□□ -1.48
Ccdc88bQ4QRL3 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ccdc88bQ4QRL3 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc88bQ4QRL3 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Ccdc88bQ4QRL3 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Ccdc88bQ4QRL3 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc88bQ4QRL3 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ccdc88bQ4QRL3 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC5.8□□□□□ -1.48
Ccdc88bQ4QRL3 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc88bQ4QRL3 Gm9119-201ENSMUST00000118866 495 ntBASIC5.8□□□□□ -1.48
Ccdc88bQ4QRL3 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ccdc88bQ4QRL3 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ccdc88bQ4QRL3 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ccdc88bQ4QRL3 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ccdc88bQ4QRL3 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ccdc88bQ4QRL3 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC5.8□□□□□ -1.48
Ccdc88bQ4QRL3 Gm28282-201ENSMUST00000186072 186 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 154.2 ms