Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.99□□□□□ -1.77
Upf3bQ3ULL6 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm45483-201ENSMUST00000209845 1682 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm15933-201ENSMUST00000117215 616 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm7421-201ENSMUST00000119298 639 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm5943-201ENSMUST00000119458 459 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm12873-201ENSMUST00000119988 422 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm1866-201ENSMUST00000120701 477 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm7365-201ENSMUST00000120877 639 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm6373-201ENSMUST00000121026 360 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm15263-201ENSMUST00000121556 642 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm23959-201ENSMUST00000157208 324 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm23782-201ENSMUST00000157939 120 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm27189-201ENSMUST00000184119 190 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm37857-201ENSMUST00000191784 1199 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm37343-201ENSMUST00000192542 111 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm37111-201ENSMUST00000193250 634 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm43651-201ENSMUST00000199796 439 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm44972-201ENSMUST00000206419 406 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm44583-201ENSMUST00000207478 281 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm45689-201ENSMUST00000210522 133 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 AC154562.1-201ENSMUST00000226140 966 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.98□□□□□ -1.77
Upf3bQ3ULL6 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Mir690-201ENSMUST00000102110 109 ntBASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Gm23424-201ENSMUST00000103889 110 ntBASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Gm23697-201ENSMUST00000103897 110 ntBASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Gm11965-201ENSMUST00000122017 277 ntBASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Gm8988-201ENSMUST00000155015 1240 ntBASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Gm22277-201ENSMUST00000157204 277 ntBASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Gm26187-201ENSMUST00000157693 101 ntBASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Gm25369-201ENSMUST00000158848 132 ntBASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Gm26460-201ENSMUST00000175061 126 ntBASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Gm5473-201ENSMUST00000179326 642 ntBASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Trbv28-201ENSMUST00000192804 264 ntBASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Gm37239-201ENSMUST00000193510 141 ntBASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Gm44343-201ENSMUST00000196702 90 ntBASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Gm18194-201ENSMUST00000210455 481 ntBASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Gm5358-201ENSMUST00000212814 353 ntBASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Upf3bQ3ULL6 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms