Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC4.83□□□□□ -1.64
Usp39Q3TIX9 Gm37837-201ENSMUST00000191743 604 ntBASIC4.83□□□□□ -1.64
Usp39Q3TIX9 Gm43856-201ENSMUST00000197004 369 ntBASIC4.83□□□□□ -1.64
Usp39Q3TIX9 Igkv15-97-201ENSMUST00000197637 339 ntBASIC4.83□□□□□ -1.64
Usp39Q3TIX9 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC4.83□□□□□ -1.64
Usp39Q3TIX9 Gm18791-201ENSMUST00000204611 726 ntBASIC4.83□□□□□ -1.64
Usp39Q3TIX9 Gm19237-201ENSMUST00000205036 1132 ntBASIC4.83□□□□□ -1.64
Usp39Q3TIX9 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC4.83□□□□□ -1.64
Usp39Q3TIX9 Gm17991-201ENSMUST00000208139 297 ntBASIC4.83□□□□□ -1.64
Usp39Q3TIX9 Gm45910-201ENSMUST00000212493 1003 ntBASIC4.83□□□□□ -1.64
Usp39Q3TIX9 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC4.83□□□□□ -1.64
Usp39Q3TIX9 AC155929.1-201ENSMUST00000220217 1276 ntBASIC4.83□□□□□ -1.64
Usp39Q3TIX9 AC125484.1-201ENSMUST00000223218 234 ntBASIC4.83□□□□□ -1.64
Usp39Q3TIX9 AC154657.1-201ENSMUST00000226394 775 ntBASIC4.83□□□□□ -1.64
Usp39Q3TIX9 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Usp39Q3TIX9 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Usp39Q3TIX9 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Usp39Q3TIX9 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Usp39Q3TIX9 Gm26064-201ENSMUST00000083381 109 ntBASIC4.83□□□□□ -1.64
Usp39Q3TIX9 Gm25512-201ENSMUST00000083863 107 ntBASIC4.83□□□□□ -1.64
Usp39Q3TIX9 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Usp39Q3TIX9 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.83□□□□□ -1.64
Usp39Q3TIX9 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Usp39Q3TIX9 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC4.83□□□□□ -1.64
Usp39Q3TIX9 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Usp39Q3TIX9 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm4541-201ENSMUST00000208901 1848 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm22272-201ENSMUST00000104039 134 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm22019-201ENSMUST00000104359 96 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm5353-201ENSMUST00000139800 793 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm23760-201ENSMUST00000158350 116 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm22076-201ENSMUST00000158601 84 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm23028-201ENSMUST00000158773 265 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm15946-201ENSMUST00000160654 423 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm21815-201ENSMUST00000178213 664 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm18828-202ENSMUST00000181035 310 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm27342-201ENSMUST00000183530 109 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm43370-201ENSMUST00000196437 284 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm42924-201ENSMUST00000197261 185 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Olfr1309-201ENSMUST00000207885 964 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm18127-201ENSMUST00000208479 725 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 AC137127.3-201ENSMUST00000213340 349 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 AC154510.1-201ENSMUST00000223925 737 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 AC154576.2-203ENSMUST00000224736 253 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 AC192333.2-201ENSMUST00000224771 196 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm23626-201ENSMUST00000082458 133 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm9386-201ENSMUST00000095195 381 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm29293-201ENSMUST00000189416 2188 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
Usp39Q3TIX9 Gm37630-201ENSMUST00000194210 1456 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Gm42483-201ENSMUST00000197556 1742 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Usp39Q3TIX9 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms