Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
Ebf1Q07802 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
Ebf1Q07802 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.32□□□□□ -1.56
Ebf1Q07802 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
Ebf1Q07802 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.31□□□□□ -1.56
Ebf1Q07802 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ebf1Q07802 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ebf1Q07802 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Ebf1Q07802 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC5.31□□□□□ -1.56
Ebf1Q07802 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.31□□□□□ -1.56
Ebf1Q07802 Gm43209-201ENSMUST00000198949 1588 ntBASIC5.31□□□□□ -1.56
Ebf1Q07802 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ebf1Q07802 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Ebf1Q07802 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Ebf1Q07802 Gm24170-201ENSMUST00000104124 133 ntBASIC5.31□□□□□ -1.56
Ebf1Q07802 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ebf1Q07802 Gm14605-201ENSMUST00000120599 268 ntBASIC5.31□□□□□ -1.56
Ebf1Q07802 Gm12110-201ENSMUST00000121601 579 ntBASIC5.31□□□□□ -1.56
Ebf1Q07802 Gm13356-201ENSMUST00000121678 335 ntBASIC5.31□□□□□ -1.56
Ebf1Q07802 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ebf1Q07802 Gm16254-201ENSMUST00000131528 730 ntBASIC5.31□□□□□ -1.56
Ebf1Q07802 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ebf1Q07802 Gm23964-201ENSMUST00000157966 107 ntBASIC5.31□□□□□ -1.56
Ebf1Q07802 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC5.31□□□□□ -1.56
Ebf1Q07802 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC5.31□□□□□ -1.56
Ebf1Q07802 Gm27148-201ENSMUST00000185086 160 ntBASIC5.31□□□□□ -1.56
Ebf1Q07802 Gm28847-201ENSMUST00000186778 700 ntBASIC5.31□□□□□ -1.56
Ebf1Q07802 Gm38040-201ENSMUST00000193505 225 ntBASIC5.31□□□□□ -1.56
Ebf1Q07802 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC5.31□□□□□ -1.56
Ebf1Q07802 Gm18924-201ENSMUST00000211929 316 ntBASIC5.31□□□□□ -1.56
Ebf1Q07802 Gm5023-201ENSMUST00000217442 587 ntBASIC5.31□□□□□ -1.56
Ebf1Q07802 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.31□□□□□ -1.56
Ebf1Q07802 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC5.31□□□□□ -1.56
Ebf1Q07802 AC131745.1-201ENSMUST00000223660 330 ntBASIC5.31□□□□□ -1.56
Ebf1Q07802 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC5.31□□□□□ -1.56
Ebf1Q07802 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Ebf1Q07802 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Ebf1Q07802 Gm23508-201ENSMUST00000083079 72 ntBASIC5.31□□□□□ -1.56
Ebf1Q07802 Snord38a-201ENSMUST00000083746 71 ntBASIC5.31□□□□□ -1.56
Ebf1Q07802 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Ebf1Q07802 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ebf1Q07802 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ebf1Q07802 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.31□□□□□ -1.56
Ebf1Q07802 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ebf1Q07802 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ebf1Q07802 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ebf1Q07802 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ebf1Q07802 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ebf1Q07802 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ebf1Q07802 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Ebf1Q07802 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ebf1Q07802 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ebf1Q07802 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ebf1Q07802 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
Ebf1Q07802 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ebf1Q07802 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ebf1Q07802 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ebf1Q07802 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Ebf1Q07802 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ebf1Q07802 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.3□□□□□ -1.56
Ebf1Q07802 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Ebf1Q07802 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Ebf1Q07802 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ebf1Q07802 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ebf1Q07802 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ebf1Q07802 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC5.3□□□□□ -1.56
Ebf1Q07802 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Ebf1Q07802 Gm22266-201ENSMUST00000104011 138 ntBASIC5.3□□□□□ -1.56
Ebf1Q07802 Gm26376-201ENSMUST00000104784 110 ntBASIC5.3□□□□□ -1.56
Ebf1Q07802 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.3□□□□□ -1.56
Ebf1Q07802 Gm14128-201ENSMUST00000119514 1011 ntBASIC5.3□□□□□ -1.56
Ebf1Q07802 Gm12340-201ENSMUST00000121617 462 ntBASIC5.3□□□□□ -1.56
Ebf1Q07802 Gm22519-201ENSMUST00000158270 178 ntBASIC5.3□□□□□ -1.56
Ebf1Q07802 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Ebf1Q07802 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Ebf1Q07802 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ebf1Q07802 Gm20794-201ENSMUST00000177626 628 ntBASIC5.3□□□□□ -1.56
Ebf1Q07802 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.3□□□□□ -1.56
Ebf1Q07802 Gm28008-201ENSMUST00000184021 186 ntBASIC5.3□□□□□ -1.56
Ebf1Q07802 Gm27660-201ENSMUST00000184028 208 ntBASIC5.3□□□□□ -1.56
Ebf1Q07802 Mir6238-201ENSMUST00000184140 129 ntBASIC5.3□□□□□ -1.56
Ebf1Q07802 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC5.3□□□□□ -1.56
Ebf1Q07802 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.3□□□□□ -1.56
Ebf1Q07802 Gm6510-201ENSMUST00000195916 574 ntBASIC5.3□□□□□ -1.56
Ebf1Q07802 Gm43524-201ENSMUST00000197278 298 ntBASIC5.3□□□□□ -1.56
Ebf1Q07802 Gm44259-201ENSMUST00000204996 298 ntBASIC5.3□□□□□ -1.56
Ebf1Q07802 Gm45032-201ENSMUST00000205375 520 ntBASIC5.3□□□□□ -1.56
Ebf1Q07802 Gm45081-201ENSMUST00000206281 572 ntBASIC5.3□□□□□ -1.56
Ebf1Q07802 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC5.3□□□□□ -1.56
Ebf1Q07802 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Ebf1Q07802 Gm45742-201ENSMUST00000212400 433 ntBASIC5.3□□□□□ -1.56
Ebf1Q07802 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.3□□□□□ -1.56
Ebf1Q07802 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.3□□□□□ -1.56
Ebf1Q07802 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC5.3□□□□□ -1.56
Ebf1Q07802 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.3□□□□□ -1.56
Ebf1Q07802 AV026068-237ENSMUST00000226075 572 ntBASIC5.3□□□□□ -1.56
Ebf1Q07802 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.3□□□□□ -1.56
Ebf1Q07802 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ebf1Q07802 Gm23972-201ENSMUST00000083322 165 ntBASIC5.3□□□□□ -1.56
Ebf1Q07802 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 136.1 ms