Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Hmgb1P63158 n-R5s196-201ENSMUST00000083136 117 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Hmgb1P63158 Gm7171-201ENSMUST00000177413 1349 ntBASIC5.4□□□□□ -1.55
Hmgb1P63158 Gm44789-201ENSMUST00000207195 3101 ntBASIC5.4□□□□□ -1.55
Hmgb1P63158 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Hmgb1P63158 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb1P63158 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Hmgb1P63158 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
Hmgb1P63158 Gm25419-201ENSMUST00000104215 191 ntBASIC5.39□□□□□ -1.55
Hmgb1P63158 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb1P63158 Gm12423-201ENSMUST00000118334 135 ntBASIC5.39□□□□□ -1.55
Hmgb1P63158 Gm11790-201ENSMUST00000119569 455 ntBASIC5.39□□□□□ -1.55
Hmgb1P63158 Gm15452-201ENSMUST00000119877 240 ntBASIC5.39□□□□□ -1.55
Hmgb1P63158 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb1P63158 Gm22143-201ENSMUST00000157401 203 ntBASIC5.39□□□□□ -1.55
Hmgb1P63158 Gm10319-202ENSMUST00000159439 846 ntBASIC5.39□□□□□ -1.55
Hmgb1P63158 Spanxn4-201ENSMUST00000172433 424 ntBASIC5.39□□□□□ -1.55
Hmgb1P63158 Gm27580-201ENSMUST00000183666 149 ntBASIC5.39□□□□□ -1.55
Hmgb1P63158 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.39□□□□□ -1.55
Hmgb1P63158 Gm37599-201ENSMUST00000193067 489 ntBASIC5.39□□□□□ -1.55
Hmgb1P63158 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.39□□□□□ -1.55
Hmgb1P63158 Gm43794-201ENSMUST00000200971 692 ntBASIC5.39□□□□□ -1.55
Hmgb1P63158 Gm32536-201ENSMUST00000205209 445 ntBASIC5.39□□□□□ -1.55
Hmgb1P63158 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC5.39□□□□□ -1.55
Hmgb1P63158 AC152951.1-201ENSMUST00000218907 266 ntBASIC5.39□□□□□ -1.55
Hmgb1P63158 Gm29774-201ENSMUST00000219270 436 ntBASIC5.39□□□□□ -1.55
Hmgb1P63158 Gm7822-201ENSMUST00000222433 581 ntBASIC5.39□□□□□ -1.55
Hmgb1P63158 Gm7768-201ENSMUST00000222988 597 ntBASIC5.39□□□□□ -1.55
Hmgb1P63158 AC154532.2-201ENSMUST00000228947 598 ntBASIC5.39□□□□□ -1.55
Hmgb1P63158 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb1P63158 Gm9818-201ENSMUST00000050900 255 ntBASIC5.39□□□□□ -1.55
Hmgb1P63158 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Hmgb1P63158 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Hmgb1P63158 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
Hmgb1P63158 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Hmgb1P63158 Mir338-201ENSMUST00000083666 98 ntBASIC5.39□□□□□ -1.55
Hmgb1P63158 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb1P63158 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb1P63158 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Hmgb1P63158 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb1P63158 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Hmgb1P63158 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb1P63158 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Hmgb1P63158 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Hmgb1P63158 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hmgb1P63158 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Hmgb1P63158 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.38□□□□□ -1.55
Hmgb1P63158 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Hmgb1P63158 Gm8995-201ENSMUST00000184842 7280 ntBASIC5.38□□□□□ -1.55
Hmgb1P63158 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Hmgb1P63158 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Hmgb1P63158 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Hmgb1P63158 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hmgb1P63158 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Hmgb1P63158 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Hmgb1P63158 Gm11874-201ENSMUST00000117437 130 ntBASIC5.38□□□□□ -1.55
Hmgb1P63158 Gm14358-201ENSMUST00000118458 403 ntBASIC5.38□□□□□ -1.55
Hmgb1P63158 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.38□□□□□ -1.55
Hmgb1P63158 Gm13488-201ENSMUST00000120419 179 ntBASIC5.38□□□□□ -1.55
Hmgb1P63158 Gm16412-201ENSMUST00000121602 273 ntBASIC5.38□□□□□ -1.55
Hmgb1P63158 Gm15157-201ENSMUST00000121852 702 ntBASIC5.38□□□□□ -1.55
Hmgb1P63158 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC5.38□□□□□ -1.55
Hmgb1P63158 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Hmgb1P63158 Gm25058-201ENSMUST00000157365 128 ntBASIC5.38□□□□□ -1.55
Hmgb1P63158 Gm10177-202ENSMUST00000161698 207 ntBASIC5.38□□□□□ -1.55
Hmgb1P63158 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC5.38□□□□□ -1.55
Hmgb1P63158 Gm24811-201ENSMUST00000175313 100 ntBASIC5.38□□□□□ -1.55
Hmgb1P63158 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC5.38□□□□□ -1.55
Hmgb1P63158 Igkv3-8-201ENSMUST00000197635 339 ntBASIC5.38□□□□□ -1.55
Hmgb1P63158 Gm19244-201ENSMUST00000204340 253 ntBASIC5.38□□□□□ -1.55
Hmgb1P63158 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Hmgb1P63158 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.38□□□□□ -1.55
Hmgb1P63158 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Hmgb1P63158 Gm18252-203ENSMUST00000215855 757 ntBASIC5.38□□□□□ -1.55
Hmgb1P63158 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Hmgb1P63158 Gm3800-201ENSMUST00000221086 554 ntBASIC5.38□□□□□ -1.55
Hmgb1P63158 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.38□□□□□ -1.55
Hmgb1P63158 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.38□□□□□ -1.55
Hmgb1P63158 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Hmgb1P63158 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Hmgb1P63158 AC132237.1-201ENSMUST00000220950 4475 ntBASIC5.38□□□□□ -1.55
Hmgb1P63158 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Hmgb1P63158 Gm37115-201ENSMUST00000193750 2849 ntBASIC5.38□□□□□ -1.55
Hmgb1P63158 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Hmgb1P63158 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Hmgb1P63158 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Hmgb1P63158 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Hmgb1P63158 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Hmgb1P63158 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Hmgb1P63158 Gm13491-201ENSMUST00000118267 235 ntBASIC5.37□□□□□ -1.55
Hmgb1P63158 Mup-ps16-201ENSMUST00000120085 596 ntBASIC5.37□□□□□ -1.55
Hmgb1P63158 Gm14619-201ENSMUST00000120480 168 ntBASIC5.37□□□□□ -1.55
Hmgb1P63158 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.37□□□□□ -1.55
Hmgb1P63158 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.37□□□□□ -1.55
Hmgb1P63158 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC5.37□□□□□ -1.55
Hmgb1P63158 Gm16259-201ENSMUST00000145241 553 ntBASIC5.37□□□□□ -1.55
Hmgb1P63158 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC5.37□□□□□ -1.55
Hmgb1P63158 Gm24061-201ENSMUST00000157489 120 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 152.9 ms