Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Cux1P53564 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Cux1P53564 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.39□□□□□ -1.55
Cux1P53564 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Cux1P53564 Gm25308-201ENSMUST00000104171 158 ntBASIC5.39□□□□□ -1.55
Cux1P53564 Gm14586-201ENSMUST00000119571 408 ntBASIC5.39□□□□□ -1.55
Cux1P53564 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC5.39□□□□□ -1.55
Cux1P53564 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
Cux1P53564 Gm27374-201ENSMUST00000183660 81 ntBASIC5.39□□□□□ -1.55
Cux1P53564 Gm42621-201ENSMUST00000198114 275 ntBASIC5.39□□□□□ -1.55
Cux1P53564 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Cux1P53564 AC144783.2-201ENSMUST00000219089 195 ntBASIC5.39□□□□□ -1.55
Cux1P53564 AC132384.13-201ENSMUST00000219556 1159 ntBASIC5.39□□□□□ -1.55
Cux1P53564 AC134439.2-201ENSMUST00000221950 467 ntBASIC5.39□□□□□ -1.55
Cux1P53564 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Cux1P53564 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Cux1P53564 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Cux1P53564 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Cux1P53564 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Cux1P53564 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cux1P53564 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cux1P53564 Gm15021-201ENSMUST00000117832 742 ntBASIC5.38□□□□□ -1.55
Cux1P53564 Gm14581-201ENSMUST00000121726 198 ntBASIC5.38□□□□□ -1.55
Cux1P53564 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cux1P53564 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC5.38□□□□□ -1.55
Cux1P53564 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cux1P53564 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC5.38□□□□□ -1.55
Cux1P53564 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC5.38□□□□□ -1.55
Cux1P53564 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cux1P53564 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cux1P53564 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cux1P53564 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cux1P53564 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cux1P53564 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Cux1P53564 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
Cux1P53564 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cux1P53564 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
Cux1P53564 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cux1P53564 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
Cux1P53564 Gm11576-201ENSMUST00000117433 417 ntBASIC5.38□□□□□ -1.55
Cux1P53564 Gm15231-201ENSMUST00000119174 447 ntBASIC5.38□□□□□ -1.55
Cux1P53564 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC5.38□□□□□ -1.55
Cux1P53564 Gm24914-201ENSMUST00000157285 313 ntBASIC5.38□□□□□ -1.55
Cux1P53564 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC5.38□□□□□ -1.55
Cux1P53564 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC5.38□□□□□ -1.55
Cux1P53564 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC5.38□□□□□ -1.55
Cux1P53564 CT009604.2-201ENSMUST00000225531 377 ntBASIC5.38□□□□□ -1.55
Cux1P53564 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Cux1P53564 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Cux1P53564 Gm42888-201ENSMUST00000202425 4361 ntBASIC5.37□□□□□ -1.55
Cux1P53564 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Cux1P53564 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cux1P53564 Gm37625-201ENSMUST00000194969 4872 ntBASIC5.37□□□□□ -1.55
Cux1P53564 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cux1P53564 AC154386.1-201ENSMUST00000222753 2871 ntBASIC5.37□□□□□ -1.55
Cux1P53564 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC5.37□□□□□ -1.55
Cux1P53564 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC5.37□□□□□ -1.55
Cux1P53564 Gm6762-201ENSMUST00000121769 289 ntBASIC5.37□□□□□ -1.55
Cux1P53564 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cux1P53564 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC5.37□□□□□ -1.55
Cux1P53564 Gm37288-201ENSMUST00000193963 334 ntBASIC5.37□□□□□ -1.55
Cux1P53564 Gm43651-201ENSMUST00000199796 439 ntBASIC5.37□□□□□ -1.55
Cux1P53564 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC5.37□□□□□ -1.55
Cux1P53564 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Cux1P53564 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cux1P53564 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Cux1P53564 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Cux1P53564 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cux1P53564 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cux1P53564 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Cux1P53564 Gm7308-201ENSMUST00000121087 447 ntBASIC5.36□□□□□ -1.55
Cux1P53564 Gm7142-201ENSMUST00000194232 586 ntBASIC5.36□□□□□ -1.55
Cux1P53564 Gm38088-201ENSMUST00000195829 241 ntBASIC5.36□□□□□ -1.55
Cux1P53564 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cux1P53564 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC5.36□□□□□ -1.55
Cux1P53564 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC5.36□□□□□ -1.55
Cux1P53564 Gm42870-201ENSMUST00000199355 3470 ntBASIC5.36□□□□□ -1.55
Cux1P53564 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Cux1P53564 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Cux1P53564 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Cux1P53564 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
Cux1P53564 Gm13170-201ENSMUST00000119716 643 ntBASIC5.35□□□□□ -1.55
Cux1P53564 Gm13692-201ENSMUST00000120774 371 ntBASIC5.35□□□□□ -1.55
Cux1P53564 Gm14810-201ENSMUST00000121628 486 ntBASIC5.35□□□□□ -1.55
Cux1P53564 Gm8840-201ENSMUST00000122454 386 ntBASIC5.35□□□□□ -1.55
Cux1P53564 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cux1P53564 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC5.35□□□□□ -1.55
Cux1P53564 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Cux1P53564 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC5.35□□□□□ -1.55
Cux1P53564 Igkv2-113-201ENSMUST00000196138 362 ntBASIC5.35□□□□□ -1.55
Cux1P53564 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cux1P53564 Gm45513-201ENSMUST00000210228 376 ntBASIC5.35□□□□□ -1.55
Cux1P53564 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Cux1P53564 CT025680.1-201ENSMUST00000217375 375 ntBASIC5.35□□□□□ -1.55
Cux1P53564 Gm8681-201ENSMUST00000219115 618 ntBASIC5.35□□□□□ -1.55
Cux1P53564 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC5.35□□□□□ -1.55
Cux1P53564 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cux1P53564 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC5.35□□□□□ -1.55
Cux1P53564 AC166369.3-201ENSMUST00000227286 409 ntBASIC5.35□□□□□ -1.55
Cux1P53564 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms