Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm14714-201ENSMUST00000119743 439 ntBASIC3.57□□□□□ -1.84
Cdx2P43241 Gm23755-201ENSMUST00000157578 343 ntBASIC3.57□□□□□ -1.84
Cdx2P43241 Gm25860-201ENSMUST00000158252 126 ntBASIC3.57□□□□□ -1.84
Cdx2P43241 Gm23385-201ENSMUST00000158592 295 ntBASIC3.57□□□□□ -1.84
Cdx2P43241 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.57□□□□□ -1.84
Cdx2P43241 Gm24520-201ENSMUST00000179510 110 ntBASIC3.57□□□□□ -1.84
Cdx2P43241 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.57□□□□□ -1.84
Cdx2P43241 Gm29747-201ENSMUST00000194764 585 ntBASIC3.57□□□□□ -1.84
Cdx2P43241 Gm38234-201ENSMUST00000195204 421 ntBASIC3.57□□□□□ -1.84
Cdx2P43241 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC3.57□□□□□ -1.84
Cdx2P43241 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.57□□□□□ -1.84
Cdx2P43241 Gm43491-201ENSMUST00000197133 784 ntBASIC3.57□□□□□ -1.84
Cdx2P43241 Mir7682-201ENSMUST00000198467 58 ntBASIC3.57□□□□□ -1.84
Cdx2P43241 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.57□□□□□ -1.84
Cdx2P43241 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC3.57□□□□□ -1.84
Cdx2P43241 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Cdx2P43241 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC3.57□□□□□ -1.84
Cdx2P43241 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Cdx2P43241 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Cdx2P43241 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Cdx2P43241 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Cdx2P43241 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Cdx2P43241 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Cdx2P43241 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Cdx2P43241 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Cdx2P43241 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Cdx2P43241 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Cdx2P43241 Gm22423-201ENSMUST00000082861 184 ntBASIC3.57□□□□□ -1.84
Cdx2P43241 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.57□□□□□ -1.84
Cdx2P43241 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Cdx2P43241 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
Cdx2P43241 Gm43327-201ENSMUST00000199285 4055 ntBASIC3.57□□□□□ -1.84
Cdx2P43241 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Cdx2P43241 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Cdx2P43241 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Cdx2P43241 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Cdx2P43241 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Cdx2P43241 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Cdx2P43241 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.56□□□□□ -1.84
Cdx2P43241 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Cdx2P43241 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Cdx2P43241 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Cdx2P43241 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Cdx2P43241 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Cdx2P43241 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.56□□□□□ -1.84
Cdx2P43241 Gm37742-201ENSMUST00000193263 3979 ntBASIC3.56□□□□□ -1.84
Cdx2P43241 Gm15387-201ENSMUST00000120421 648 ntBASIC3.56□□□□□ -1.84
Cdx2P43241 Gm12005-201ENSMUST00000121451 379 ntBASIC3.56□□□□□ -1.84
Cdx2P43241 Gm13508-201ENSMUST00000121639 775 ntBASIC3.56□□□□□ -1.84
Cdx2P43241 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC3.56□□□□□ -1.84
Cdx2P43241 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.56□□□□□ -1.84
Cdx2P43241 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Cdx2P43241 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Cdx2P43241 Gm4540-201ENSMUST00000170669 429 ntBASIC3.56□□□□□ -1.84
Cdx2P43241 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.56□□□□□ -1.84
Cdx2P43241 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Cdx2P43241 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.56□□□□□ -1.84
Cdx2P43241 Gm8641-201ENSMUST00000186995 826 ntBASIC3.56□□□□□ -1.84
Cdx2P43241 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.56□□□□□ -1.84
Cdx2P43241 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Cdx2P43241 Gm7946-201ENSMUST00000203326 958 ntBASIC3.56□□□□□ -1.84
Cdx2P43241 Gm44371-201ENSMUST00000204148 467 ntBASIC3.56□□□□□ -1.84
Cdx2P43241 Gm44513-201ENSMUST00000206811 439 ntBASIC3.56□□□□□ -1.84
Cdx2P43241 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC3.56□□□□□ -1.84
Cdx2P43241 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC3.56□□□□□ -1.84
Cdx2P43241 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Cdx2P43241 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Cdx2P43241 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Cdx2P43241 Gm5518-201ENSMUST00000084171 648 ntBASIC3.56□□□□□ -1.84
Cdx2P43241 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Cdx2P43241 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Cdx2P43241 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
Cdx2P43241 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Cdx2P43241 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Cdx2P43241 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Cdx2P43241 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Cdx2P43241 AC124586.1-201ENSMUST00000221673 2795 ntBASIC3.56□□□□□ -1.84
Cdx2P43241 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.56□□□□□ -1.84
Cdx2P43241 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Cdx2P43241 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Cdx2P43241 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Cdx2P43241 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Cdx2P43241 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Cdx2P43241 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Cdx2P43241 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Cdx2P43241 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Cdx2P43241 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC3.55□□□□□ -1.84
Cdx2P43241 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Cdx2P43241 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Cdx2P43241 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Cdx2P43241 Gm15933-201ENSMUST00000117215 616 ntBASIC3.55□□□□□ -1.84
Cdx2P43241 Gm13831-201ENSMUST00000118764 302 ntBASIC3.55□□□□□ -1.84
Cdx2P43241 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC3.55□□□□□ -1.84
Cdx2P43241 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC3.55□□□□□ -1.84
Cdx2P43241 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC3.55□□□□□ -1.84
Cdx2P43241 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.55□□□□□ -1.84
Cdx2P43241 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC3.55□□□□□ -1.84
Cdx2P43241 Gm22923-201ENSMUST00000174952 110 ntBASIC3.55□□□□□ -1.84
Cdx2P43241 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.55□□□□□ -1.84
Cdx2P43241 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 104.6 ms