Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.53□□□□□ -1.52
Hoxd9P28357 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Hoxd9P28357 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.52□□□□□ -1.53
Hoxd9P28357 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Hoxd9P28357 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Hoxd9P28357 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Hoxd9P28357 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Hoxd9P28357 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 Gm13991-201ENSMUST00000120190 648 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Hoxd9P28357 Gm8761-201ENSMUST00000121507 955 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Hoxd9P28357 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.52□□□□□ -1.53
Hoxd9P28357 Gm23169-201ENSMUST00000157157 112 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 Gm24289-201ENSMUST00000157629 135 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 Gm24767-201ENSMUST00000158509 95 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 Gm23704-201ENSMUST00000158844 340 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 Gm18199-201ENSMUST00000173820 835 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 Gm22646-201ENSMUST00000175130 115 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Hoxd9P28357 Mir7235-201ENSMUST00000183796 56 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 Gm27266-201ENSMUST00000184521 123 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 Gm7266-201ENSMUST00000187999 405 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 Gm36999-201ENSMUST00000192756 1046 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC5.52□□□□□ -1.53
Hoxd9P28357 Igkv15-102-201ENSMUST00000197885 287 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 Gm43393-201ENSMUST00000200147 194 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 Gm44108-201ENSMUST00000203525 422 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Hoxd9P28357 AL669916.5-201ENSMUST00000214874 361 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 AC154224.1-201ENSMUST00000224367 403 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 AL606513.1-201ENSMUST00000225369 579 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 AC117656.1-201ENSMUST00000225826 339 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Hoxd9P28357 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Hoxd9P28357 Gm23737-201ENSMUST00000082547 159 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 Snora44-201ENSMUST00000082670 129 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.52□□□□□ -1.53
Hoxd9P28357 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.52□□□□□ -1.53
Hoxd9P28357 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Hoxd9P28357 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.51□□□□□ -1.53
Hoxd9P28357 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd9P28357 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd9P28357 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Hoxd9P28357 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd9P28357 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd9P28357 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd9P28357 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm21379-201ENSMUST00000179772 1955 ntBASIC5.51□□□□□ -1.53
Hoxd9P28357 AC164297.1-201ENSMUST00000224484 1561 ntBASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Hoxd9P28357 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd9P28357 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Hoxd9P28357 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd9P28357 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd9P28357 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Hoxd9P28357 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm12099-201ENSMUST00000118660 750 ntBASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm15331-201ENSMUST00000120225 385 ntBASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm14240-201ENSMUST00000120353 546 ntBASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm11200-201ENSMUST00000121698 448 ntBASIC5.51□□□□□ -1.53
Hoxd9P28357 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm22867-201ENSMUST00000157499 109 ntBASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm23779-201ENSMUST00000157938 64 ntBASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm25459-201ENSMUST00000157953 114 ntBASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm24303-201ENSMUST00000178237 126 ntBASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm24957-201ENSMUST00000179604 132 ntBASIC5.51□□□□□ -1.53
Hoxd9P28357 Mir6973b-201ENSMUST00000184185 80 ntBASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm19641-201ENSMUST00000188432 417 ntBASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.51□□□□□ -1.53
Hoxd9P28357 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm44811-201ENSMUST00000209120 228 ntBASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm4032-201ENSMUST00000210886 487 ntBASIC5.51□□□□□ -1.53
Hoxd9P28357 AC145736.2-201ENSMUST00000216305 365 ntBASIC5.51□□□□□ -1.53
Hoxd9P28357 CT572985.2-201ENSMUST00000220496 211 ntBASIC5.51□□□□□ -1.53
Hoxd9P28357 AC153646.2-201ENSMUST00000220516 109 ntBASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.51□□□□□ -1.53
Hoxd9P28357 CT025157.1-201ENSMUST00000226241 292 ntBASIC5.51□□□□□ -1.53
Hoxd9P28357 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd9P28357 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd9P28357 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd9P28357 Mir298-201ENSMUST00000083476 82 ntBASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm24029-201ENSMUST00000083928 143 ntBASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd9P28357 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd9P28357 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Hoxd9P28357 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC5.51□□□□□ -1.53
Hoxd9P28357 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms