Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Sdc1P18828 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
Sdc1P18828 Gm13230-201ENSMUST00000120870 1575 ntBASIC3.25□□□□□ -1.89
Sdc1P18828 Gm43201-201ENSMUST00000195925 3416 ntBASIC3.25□□□□□ -1.89
Sdc1P18828 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Sdc1P18828 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Sdc1P18828 Gm336-201ENSMUST00000186376 1480 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Sdc1P18828 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Sdc1P18828 Gm24318-201ENSMUST00000104490 131 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Sdc1P18828 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Sdc1P18828 Gm12901-201ENSMUST00000118690 532 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Gm13887-201ENSMUST00000119009 344 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Gm5942-201ENSMUST00000120046 439 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Gm16359-201ENSMUST00000124511 289 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Gm2892-201ENSMUST00000145537 711 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3.24□□□□□ -1.89
Sdc1P18828 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Gm16563-201ENSMUST00000162673 423 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Gm9027-201ENSMUST00000165914 661 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Gm9587-201ENSMUST00000172449 454 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC3.24□□□□□ -1.89
Sdc1P18828 Mir6903-201ENSMUST00000183597 88 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Sdc1P18828 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC3.24□□□□□ -1.89
Sdc1P18828 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.24□□□□□ -1.89
Sdc1P18828 Gm37631-201ENSMUST00000192275 364 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Gm19231-201ENSMUST00000193212 830 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Gm37431-201ENSMUST00000195102 111 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC3.24□□□□□ -1.89
Sdc1P18828 Gm42516-201ENSMUST00000198691 767 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Trav3-2-201ENSMUST00000198999 305 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Gm42758-201ENSMUST00000202146 283 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC3.24□□□□□ -1.89
Sdc1P18828 Gm45026-201ENSMUST00000205292 833 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Gm3189-201ENSMUST00000205595 832 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Gm6112-201ENSMUST00000208037 629 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Gm18602-201ENSMUST00000209794 851 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 AC161114.1-201ENSMUST00000218223 474 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Sdc1P18828 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC3.24□□□□□ -1.89
Sdc1P18828 AC161884.2-201ENSMUST00000224513 227 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
Sdc1P18828 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Sdc1P18828 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Sdc1P18828 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Sdc1P18828 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Sdc1P18828 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Sdc1P18828 Gm23514-201ENSMUST00000082827 130 ntBASIC3.24□□□□□ -1.89
Sdc1P18828 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Sdc1P18828 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Sdc1P18828 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Sdc1P18828 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Sdc1P18828 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Sdc1P18828 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Sdc1P18828 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Sdc1P18828 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Sdc1P18828 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Sdc1P18828 Gm23910-201ENSMUST00000104597 132 ntBASIC3.23□□□□□ -1.89
Sdc1P18828 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.23□□□□□ -1.89
Sdc1P18828 Gm4342-201ENSMUST00000118982 367 ntBASIC3.23□□□□□ -1.89
Sdc1P18828 Gm12788-201ENSMUST00000119090 308 ntBASIC3.23□□□□□ -1.89
Sdc1P18828 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC3.23□□□□□ -1.89
Sdc1P18828 Gm14768-201ENSMUST00000122126 678 ntBASIC3.23□□□□□ -1.89
Sdc1P18828 Gm16254-201ENSMUST00000131528 730 ntBASIC3.23□□□□□ -1.89
Sdc1P18828 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC3.23□□□□□ -1.89
Sdc1P18828 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Sdc1P18828 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC3.23□□□□□ -1.89
Sdc1P18828 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC3.23□□□□□ -1.89
Sdc1P18828 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC3.23□□□□□ -1.89
Sdc1P18828 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Sdc1P18828 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC3.23□□□□□ -1.89
Sdc1P18828 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC3.23□□□□□ -1.89
Sdc1P18828 Mir7008-201ENSMUST00000184398 63 ntBASIC3.23□□□□□ -1.89
Sdc1P18828 Gm27445-201ENSMUST00000184484 72 ntBASIC3.23□□□□□ -1.89
Sdc1P18828 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Sdc1P18828 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Sdc1P18828 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Sdc1P18828 Gm5552-201ENSMUST00000197149 515 ntBASIC3.23□□□□□ -1.89
Sdc1P18828 Gm7838-201ENSMUST00000203221 1189 ntBASIC3.23□□□□□ -1.89
Sdc1P18828 Gm45063-201ENSMUST00000203726 472 ntBASIC3.23□□□□□ -1.89
Sdc1P18828 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC3.23□□□□□ -1.89
Sdc1P18828 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Sdc1P18828 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC3.23□□□□□ -1.89
Sdc1P18828 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.23□□□□□ -1.89
Sdc1P18828 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Sdc1P18828 AC126043.1-201ENSMUST00000221304 1141 ntBASIC3.23□□□□□ -1.89
Sdc1P18828 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.23□□□□□ -1.89
Sdc1P18828 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.23□□□□□ -1.89
Sdc1P18828 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.23□□□□□ -1.89
Sdc1P18828 CT009733.1-201ENSMUST00000225322 425 ntBASIC3.23□□□□□ -1.89
Sdc1P18828 AC116395.1-201ENSMUST00000225480 1143 ntBASIC3.23□□□□□ -1.89
Sdc1P18828 AC154838.1-201ENSMUST00000228944 911 ntBASIC3.23□□□□□ -1.89
Sdc1P18828 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms