Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm45007-201ENSMUST00000206237 366 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 Gm17779-201ENSMUST00000213395 394 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC3.44□□□□□ -1.86
Cdx1P18111 AC159380.1-201ENSMUST00000218096 121 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 Gm18507-201ENSMUST00000218855 525 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 AL606513.1-201ENSMUST00000225369 579 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 AC132112.1-201ENSMUST00000226354 505 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.44□□□□□ -1.86
Cdx1P18111 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.44□□□□□ -1.86
Cdx1P18111 Gm24166-201ENSMUST00000082724 135 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC3.44□□□□□ -1.86
Cdx1P18111 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Cdx1P18111 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Cdx1P18111 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Cdx1P18111 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Cdx1P18111 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Cdx1P18111 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Cdx1P18111 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Cdx1P18111 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Cdx1P18111 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Cdx1P18111 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Cdx1P18111 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Cdx1P18111 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Cdx1P18111 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Cdx1P18111 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Cdx1P18111 Gm24124-201ENSMUST00000104103 132 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Gm22493-201ENSMUST00000104494 132 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Cdx1P18111 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Cdx1P18111 Gm15108-201ENSMUST00000116160 803 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Gm11488-201ENSMUST00000117277 863 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Gm5942-201ENSMUST00000120046 439 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Gm15885-201ENSMUST00000122114 388 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Gm15111-201ENSMUST00000122142 878 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC3.43□□□□□ -1.86
Cdx1P18111 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC3.43□□□□□ -1.86
Cdx1P18111 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC3.43□□□□□ -1.86
Cdx1P18111 Gm2892-201ENSMUST00000145537 711 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Cdx1P18111 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Cdx1P18111 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC3.43□□□□□ -1.86
Cdx1P18111 Gm23234-201ENSMUST00000157304 134 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Zakit-201ENSMUST00000157677 308 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Gm16147-201ENSMUST00000162143 373 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Cdx1P18111 Gm3084-201ENSMUST00000169967 598 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Cdx1P18111 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC3.43□□□□□ -1.86
Cdx1P18111 Gm27414-201ENSMUST00000185033 381 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Gm28615-201ENSMUST00000187527 482 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC3.43□□□□□ -1.86
Cdx1P18111 Gm29138-201ENSMUST00000191444 348 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Gm37603-201ENSMUST00000192368 219 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Gm37601-201ENSMUST00000194922 394 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Gm18985-201ENSMUST00000196472 1079 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Gm17951-201ENSMUST00000198536 496 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Cdx1P18111 Gm43345-201ENSMUST00000199484 269 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC3.43□□□□□ -1.86
Cdx1P18111 AC156832.3-201ENSMUST00000215591 435 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 AC154198.1-201ENSMUST00000222839 424 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.43□□□□□ -1.86
Cdx1P18111 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 AC154738.2-201ENSMUST00000227403 1110 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 AC164437.2-201ENSMUST00000228915 797 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC3.43□□□□□ -1.86
Cdx1P18111 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
Cdx1P18111 Snora31-201ENSMUST00000083213 130 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Gm23460-201ENSMUST00000083258 109 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Gm26121-201ENSMUST00000083364 162 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Gm25581-201ENSMUST00000083410 164 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Gm10242-201ENSMUST00000090064 330 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
Cdx1P18111 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Cdx1P18111 Gm37099-201ENSMUST00000191902 3451 ntBASIC3.43□□□□□ -1.86
Cdx1P18111 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Cdx1P18111 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Cdx1P18111 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
Cdx1P18111 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
Cdx1P18111 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Cdx1P18111 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
Cdx1P18111 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Cdx1P18111 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Cdx1P18111 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.42□□□□□ -1.86
Cdx1P18111 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Cdx1P18111 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC3.42□□□□□ -1.86
Cdx1P18111 Gm12392-201ENSMUST00000118014 938 ntBASIC3.42□□□□□ -1.86
Cdx1P18111 Gm15553-201ENSMUST00000118757 430 ntBASIC3.42□□□□□ -1.86
Cdx1P18111 Gm14591-201ENSMUST00000120407 518 ntBASIC3.42□□□□□ -1.86
Cdx1P18111 Gm14589-201ENSMUST00000121640 727 ntBASIC3.42□□□□□ -1.86
Cdx1P18111 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms