Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm23594-201ENSMUST00000104307 134 ntBASIC4.32□□□□□ -1.72
Lire1P11260 Gm24831-201ENSMUST00000116778 126 ntBASIC4.32□□□□□ -1.72
Lire1P11260 Gm12520-201ENSMUST00000117493 316 ntBASIC4.32□□□□□ -1.72
Lire1P11260 Gm14388-201ENSMUST00000118119 477 ntBASIC4.32□□□□□ -1.72
Lire1P11260 Gm11631-201ENSMUST00000119220 156 ntBASIC4.32□□□□□ -1.72
Lire1P11260 Gm25447-201ENSMUST00000158997 128 ntBASIC4.32□□□□□ -1.72
Lire1P11260 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Lire1P11260 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC4.32□□□□□ -1.72
Lire1P11260 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.32□□□□□ -1.72
Lire1P11260 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.32□□□□□ -1.72
Lire1P11260 Gm7909-201ENSMUST00000182688 614 ntBASIC4.32□□□□□ -1.72
Lire1P11260 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Lire1P11260 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC4.32□□□□□ -1.72
Lire1P11260 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Lire1P11260 Gm6501-201ENSMUST00000187178 916 ntBASIC4.32□□□□□ -1.72
Lire1P11260 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Lire1P11260 Gm23925-202ENSMUST00000188429 132 ntBASIC4.32□□□□□ -1.72
Lire1P11260 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC4.32□□□□□ -1.72
Lire1P11260 Gm37603-201ENSMUST00000192368 219 ntBASIC4.32□□□□□ -1.72
Lire1P11260 Gm10292-202ENSMUST00000193165 585 ntBASIC4.32□□□□□ -1.72
Lire1P11260 Gm37088-201ENSMUST00000193887 406 ntBASIC4.32□□□□□ -1.72
Lire1P11260 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.32□□□□□ -1.72
Lire1P11260 Gm44348-201ENSMUST00000200165 122 ntBASIC4.32□□□□□ -1.72
Lire1P11260 Gm45031-201ENSMUST00000206800 288 ntBASIC4.32□□□□□ -1.72
Lire1P11260 Gm18306-201ENSMUST00000207338 569 ntBASIC4.32□□□□□ -1.72
Lire1P11260 Gm44648-201ENSMUST00000208267 329 ntBASIC4.32□□□□□ -1.72
Lire1P11260 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC4.32□□□□□ -1.72
Lire1P11260 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.32□□□□□ -1.72
Lire1P11260 AC124433.2-201ENSMUST00000223867 291 ntBASIC4.32□□□□□ -1.72
Lire1P11260 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.32□□□□□ -1.72
Lire1P11260 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.32□□□□□ -1.72
Lire1P11260 CT485608.1-201ENSMUST00000228759 389 ntBASIC4.32□□□□□ -1.72
Lire1P11260 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Lire1P11260 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Lire1P11260 n-R5s85-201ENSMUST00000083453 113 ntBASIC4.32□□□□□ -1.72
Lire1P11260 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Lire1P11260 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Lire1P11260 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.32□□□□□ -1.72
Lire1P11260 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Lire1P11260 Gm7739-201ENSMUST00000221131 1560 ntBASIC4.31□□□□□ -1.72
Lire1P11260 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.31□□□□□ -1.72
Lire1P11260 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Lire1P11260 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Lire1P11260 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Lire1P11260 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Lire1P11260 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Lire1P11260 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Lire1P11260 Gm24951-201ENSMUST00000102182 109 ntBASIC4.31□□□□□ -1.72
Lire1P11260 Gm13550-201ENSMUST00000118185 525 ntBASIC4.31□□□□□ -1.72
Lire1P11260 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC4.31□□□□□ -1.72
Lire1P11260 Gm14008-201ENSMUST00000120483 274 ntBASIC4.31□□□□□ -1.72
Lire1P11260 Gm11896-201ENSMUST00000121105 820 ntBASIC4.31□□□□□ -1.72
Lire1P11260 Gm24371-201ENSMUST00000122662 267 ntBASIC4.31□□□□□ -1.72
Lire1P11260 Gm24380-201ENSMUST00000122696 324 ntBASIC4.31□□□□□ -1.72
Lire1P11260 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.31□□□□□ -1.72
Lire1P11260 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Lire1P11260 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.31□□□□□ -1.72
Lire1P11260 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.31□□□□□ -1.72
Lire1P11260 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Lire1P11260 Gm23673-201ENSMUST00000157474 298 ntBASIC4.31□□□□□ -1.72
Lire1P11260 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Lire1P11260 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC4.31□□□□□ -1.72
Lire1P11260 Gm43704-201ENSMUST00000196164 496 ntBASIC4.31□□□□□ -1.72
Lire1P11260 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Lire1P11260 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.31□□□□□ -1.72
Lire1P11260 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC4.31□□□□□ -1.72
Lire1P11260 Gm17917-201ENSMUST00000218561 953 ntBASIC4.31□□□□□ -1.72
Lire1P11260 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Lire1P11260 AC156952.1-201ENSMUST00000220361 793 ntBASIC4.31□□□□□ -1.72
Lire1P11260 AC118006.1-201ENSMUST00000224211 501 ntBASIC4.31□□□□□ -1.72
Lire1P11260 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Lire1P11260 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
Lire1P11260 Snora52-201ENSMUST00000082732 137 ntBASIC4.31□□□□□ -1.72
Lire1P11260 Gm25581-201ENSMUST00000083410 164 ntBASIC4.31□□□□□ -1.72
Lire1P11260 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Lire1P11260 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Lire1P11260 Gm45577-201ENSMUST00000210206 2287 ntBASIC4.31□□□□□ -1.72
Lire1P11260 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Lire1P11260 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Lire1P11260 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Lire1P11260 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.31□□□□□ -1.72
Lire1P11260 Gm37983-201ENSMUST00000193207 2006 ntBASIC4.31□□□□□ -1.72
Lire1P11260 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Lire1P11260 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Lire1P11260 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Lire1P11260 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC4.3□□□□□ -1.72
Lire1P11260 Gm14304-201ENSMUST00000117272 446 ntBASIC4.3□□□□□ -1.72
Lire1P11260 Gm12691-201ENSMUST00000120186 456 ntBASIC4.3□□□□□ -1.72
Lire1P11260 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.3□□□□□ -1.72
Lire1P11260 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.3□□□□□ -1.72
Lire1P11260 Gm2892-201ENSMUST00000145537 711 ntBASIC4.3□□□□□ -1.72
Lire1P11260 Gm26098-201ENSMUST00000157247 288 ntBASIC4.3□□□□□ -1.72
Lire1P11260 Gm16589-201ENSMUST00000159522 918 ntBASIC4.3□□□□□ -1.72
Lire1P11260 Gm22177-201ENSMUST00000175002 158 ntBASIC4.3□□□□□ -1.72
Lire1P11260 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Lire1P11260 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.3□□□□□ -1.72
Lire1P11260 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC4.3□□□□□ -1.72
Lire1P11260 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC4.3□□□□□ -1.72
Lire1P11260 Gm8891-201ENSMUST00000198546 832 ntBASIC4.3□□□□□ -1.72
Lire1P11260 Gm45380-201ENSMUST00000210465 315 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms