Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm11673-201ENSMUST00000117846 331 ntBASIC3.98□□□□□ -1.77
TnfP06804 Gm11483-201ENSMUST00000119839 247 ntBASIC3.98□□□□□ -1.77
TnfP06804 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC3.98□□□□□ -1.77
TnfP06804 Gm16005-201ENSMUST00000120515 269 ntBASIC3.98□□□□□ -1.77
TnfP06804 Gm11829-201ENSMUST00000121003 282 ntBASIC3.98□□□□□ -1.77
TnfP06804 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.98□□□□□ -1.77
TnfP06804 Gm11350-201ENSMUST00000121436 870 ntBASIC3.98□□□□□ -1.77
TnfP06804 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
TnfP06804 Snora81-201ENSMUST00000157310 178 ntBASIC3.98□□□□□ -1.77
TnfP06804 Gm17159-201ENSMUST00000169043 482 ntBASIC3.98□□□□□ -1.77
TnfP06804 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
TnfP06804 Gm19637-201ENSMUST00000185933 579 ntBASIC3.98□□□□□ -1.77
TnfP06804 Gm28614-201ENSMUST00000186483 458 ntBASIC3.98□□□□□ -1.77
TnfP06804 Gm17777-201ENSMUST00000189740 1276 ntBASIC3.98□□□□□ -1.77
TnfP06804 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.98□□□□□ -1.77
TnfP06804 Gm36954-201ENSMUST00000195362 363 ntBASIC3.98□□□□□ -1.77
TnfP06804 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.98□□□□□ -1.77
TnfP06804 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC3.98□□□□□ -1.77
TnfP06804 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
TnfP06804 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
TnfP06804 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
TnfP06804 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
TnfP06804 Gm43443-201ENSMUST00000202337 2393 ntBASIC3.98□□□□□ -1.77
TnfP06804 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
TnfP06804 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
TnfP06804 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.98□□□□□ -1.77
TnfP06804 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.98□□□□□ -1.77
TnfP06804 Gm18491-201ENSMUST00000192492 1594 ntBASIC3.97□□□□□ -1.77
TnfP06804 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
TnfP06804 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
TnfP06804 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
TnfP06804 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TnfP06804 Gm24608-201ENSMUST00000104381 136 ntBASIC3.97□□□□□ -1.77
TnfP06804 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC3.97□□□□□ -1.77
TnfP06804 Gm13664-201ENSMUST00000117304 345 ntBASIC3.97□□□□□ -1.77
TnfP06804 Gm15387-201ENSMUST00000120421 648 ntBASIC3.97□□□□□ -1.77
TnfP06804 Gm15014-201ENSMUST00000120742 258 ntBASIC3.97□□□□□ -1.77
TnfP06804 Gm22320-201ENSMUST00000157149 312 ntBASIC3.97□□□□□ -1.77
TnfP06804 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.97□□□□□ -1.77
TnfP06804 Gm22646-201ENSMUST00000175130 115 ntBASIC3.97□□□□□ -1.77
TnfP06804 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.97□□□□□ -1.77
TnfP06804 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
TnfP06804 Gm28010-201ENSMUST00000179485 126 ntBASIC3.97□□□□□ -1.77
TnfP06804 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.97□□□□□ -1.77
TnfP06804 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
TnfP06804 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.97□□□□□ -1.77
TnfP06804 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TnfP06804 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.97□□□□□ -1.77
TnfP06804 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TnfP06804 Gm18193-201ENSMUST00000210017 772 ntBASIC3.97□□□□□ -1.77
TnfP06804 Gm18487-201ENSMUST00000215826 878 ntBASIC3.97□□□□□ -1.77
TnfP06804 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.97□□□□□ -1.77
TnfP06804 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.97□□□□□ -1.77
TnfP06804 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.97□□□□□ -1.77
TnfP06804 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
TnfP06804 Gm24319-201ENSMUST00000083389 107 ntBASIC3.97□□□□□ -1.77
TnfP06804 Gm5518-201ENSMUST00000084171 648 ntBASIC3.97□□□□□ -1.77
TnfP06804 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.97□□□□□ -1.77
TnfP06804 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
TnfP06804 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
TnfP06804 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
TnfP06804 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
TnfP06804 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TnfP06804 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.97□□□□□ -1.77
TnfP06804 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.96□□□□□ -1.78
TnfP06804 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.96□□□□□ -1.78
TnfP06804 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TnfP06804 Gm25764-201ENSMUST00000104092 134 ntBASIC3.96□□□□□ -1.78
TnfP06804 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TnfP06804 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC3.96□□□□□ -1.78
TnfP06804 Gm14050-201ENSMUST00000117052 346 ntBASIC3.96□□□□□ -1.78
TnfP06804 Gm14816-201ENSMUST00000117174 294 ntBASIC3.96□□□□□ -1.78
TnfP06804 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
TnfP06804 Gm22310-201ENSMUST00000157509 116 ntBASIC3.96□□□□□ -1.78
TnfP06804 Gm25667-201ENSMUST00000157701 275 ntBASIC3.96□□□□□ -1.78
TnfP06804 Gm24976-201ENSMUST00000158972 135 ntBASIC3.96□□□□□ -1.78
TnfP06804 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TnfP06804 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TnfP06804 Gm20399-201ENSMUST00000174652 132 ntBASIC3.96□□□□□ -1.78
TnfP06804 Gm27903-201ENSMUST00000175482 126 ntBASIC3.96□□□□□ -1.78
TnfP06804 Gm28924-201ENSMUST00000190012 241 ntBASIC3.96□□□□□ -1.78
TnfP06804 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC3.96□□□□□ -1.78
TnfP06804 Gm18747-201ENSMUST00000198129 648 ntBASIC3.96□□□□□ -1.78
TnfP06804 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.96□□□□□ -1.78
TnfP06804 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.96□□□□□ -1.78
TnfP06804 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC3.96□□□□□ -1.78
TnfP06804 Gm8774-201ENSMUST00000203621 692 ntBASIC3.96□□□□□ -1.78
TnfP06804 Gm19181-201ENSMUST00000218891 940 ntBASIC3.96□□□□□ -1.78
TnfP06804 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.96□□□□□ -1.78
TnfP06804 AC099612.2-201ENSMUST00000226824 721 ntBASIC3.96□□□□□ -1.78
TnfP06804 AC155167.1-201ENSMUST00000228931 614 ntBASIC3.96□□□□□ -1.78
TnfP06804 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TnfP06804 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TnfP06804 Gm26072-201ENSMUST00000083135 107 ntBASIC3.96□□□□□ -1.78
TnfP06804 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
TnfP06804 Gm6361-201ENSMUST00000091031 435 ntBASIC3.96□□□□□ -1.78
TnfP06804 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.96□□□□□ -1.78
TnfP06804 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
TnfP06804 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TnfP06804 Gm42552-201ENSMUST00000196754 4497 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms