Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm26556-201ENSMUST00000180645 320 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm27161-201ENSMUST00000183960 562 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm28883-201ENSMUST00000189256 369 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm37272-201ENSMUST00000193401 488 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm42475-201ENSMUST00000201212 295 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm38574-201ENSMUST00000211855 640 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm7948-201ENSMUST00000212607 844 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm5917-201ENSMUST00000217638 721 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm8613-201ENSMUST00000220383 1077 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 AC119894.1-201ENSMUST00000220399 350 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm4263-201ENSMUST00000220693 1101 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 CT010506.2-201ENSMUST00000225618 183 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 AC154592.1-201ENSMUST00000225784 574 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm24610-201ENSMUST00000083270 109 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm25818-201ENSMUST00000083282 164 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm43085-201ENSMUST00000202859 3132 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Gm37180-201ENSMUST00000195335 2819 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC4.84□□□□□ -1.63
Pcdh1F7BJK1 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC4.84□□□□□ -1.64
Pcdh1F7BJK1 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.64
Pcdh1F7BJK1 Gm37761-201ENSMUST00000194989 2098 ntBASIC4.84□□□□□ -1.64
Pcdh1F7BJK1 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm43333-201ENSMUST00000198340 2262 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 n-R5s82-201ENSMUST00000104213 109 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm11372-201ENSMUST00000117348 570 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm11313-201ENSMUST00000118779 432 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm14001-201ENSMUST00000118847 247 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm15142-201ENSMUST00000121013 856 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm8761-201ENSMUST00000121507 955 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm22208-201ENSMUST00000122658 110 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm24435-201ENSMUST00000157886 110 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm24192-201ENSMUST00000157978 145 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm23354-201ENSMUST00000158426 104 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm3170-201ENSMUST00000168753 850 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm3348-201ENSMUST00000177813 850 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm27855-201ENSMUST00000184122 128 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm27210-201ENSMUST00000184263 402 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm28390-201ENSMUST00000185212 700 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm28418-201ENSMUST00000186179 423 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm9775-201ENSMUST00000189402 331 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm17781-201ENSMUST00000195232 649 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm42828-201ENSMUST00000199669 469 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm44718-201ENSMUST00000206886 359 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 AC102287.1-201ENSMUST00000211412 454 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 AC153870.1-201ENSMUST00000219599 560 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 AC156798.1-201ENSMUST00000220508 224 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 AC154636.1-201ENSMUST00000223226 126 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 AC154224.1-201ENSMUST00000224367 403 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 AC166369.2-201ENSMUST00000228403 308 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Mir375-201ENSMUST00000083682 64 ntBASIC4.83□□□□□ -1.64
Pcdh1F7BJK1 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms