Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CcsQ9WU84 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CcsQ9WU84 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CcsQ9WU84 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CcsQ9WU84 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.54□□□□□ -0.24
CcsQ9WU84 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CcsQ9WU84 Gm13234-201ENSMUST00000120010 747 ntBASIC13.54□□□□□ -0.24
CcsQ9WU84 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.54□□□□□ -0.24
CcsQ9WU84 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.54□□□□□ -0.24
CcsQ9WU84 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CcsQ9WU84 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CcsQ9WU84 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CcsQ9WU84 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.53□□□□□ -0.24
CcsQ9WU84 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CcsQ9WU84 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CcsQ9WU84 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CcsQ9WU84 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CcsQ9WU84 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
CcsQ9WU84 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CcsQ9WU84 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CcsQ9WU84 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CcsQ9WU84 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CcsQ9WU84 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC13.53□□□□□ -0.24
CcsQ9WU84 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
CcsQ9WU84 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.53□□□□□ -0.24
CcsQ9WU84 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.53□□□□□ -0.24
CcsQ9WU84 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CcsQ9WU84 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CcsQ9WU84 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CcsQ9WU84 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
CcsQ9WU84 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CcsQ9WU84 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CcsQ9WU84 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CcsQ9WU84 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CcsQ9WU84 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CcsQ9WU84 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CcsQ9WU84 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
CcsQ9WU84 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
CcsQ9WU84 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CcsQ9WU84 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CcsQ9WU84 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CcsQ9WU84 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CcsQ9WU84 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CcsQ9WU84 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CcsQ9WU84 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.52□□□□□ -0.25
CcsQ9WU84 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CcsQ9WU84 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CcsQ9WU84 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CcsQ9WU84 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CcsQ9WU84 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CcsQ9WU84 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CcsQ9WU84 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CcsQ9WU84 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CcsQ9WU84 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CcsQ9WU84 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CcsQ9WU84 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CcsQ9WU84 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CcsQ9WU84 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
CcsQ9WU84 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CcsQ9WU84 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CcsQ9WU84 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CcsQ9WU84 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CcsQ9WU84 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CcsQ9WU84 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CcsQ9WU84 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CcsQ9WU84 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CcsQ9WU84 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CcsQ9WU84 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CcsQ9WU84 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CcsQ9WU84 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
CcsQ9WU84 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CcsQ9WU84 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CcsQ9WU84 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CcsQ9WU84 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.51□□□□□ -0.25
CcsQ9WU84 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms