Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Gm27275-201ENSMUST00000184318 272 ntBASIC17.81■□□□□ 0.44
Clcn2Q9R0A1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.81■□□□□ 0.44
Clcn2Q9R0A1 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.81■□□□□ 0.44
Clcn2Q9R0A1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn2Q9R0A1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn2Q9R0A1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn2Q9R0A1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn2Q9R0A1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn2Q9R0A1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Clcn2Q9R0A1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn2Q9R0A1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn2Q9R0A1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn2Q9R0A1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn2Q9R0A1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.8■□□□□ 0.44
Clcn2Q9R0A1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.8■□□□□ 0.44
Clcn2Q9R0A1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn2Q9R0A1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn2Q9R0A1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Clcn2Q9R0A1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn2Q9R0A1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.8■□□□□ 0.44
Clcn2Q9R0A1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn2Q9R0A1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Clcn2Q9R0A1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn2Q9R0A1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn2Q9R0A1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.8■□□□□ 0.44
Clcn2Q9R0A1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Clcn2Q9R0A1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn2Q9R0A1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Clcn2Q9R0A1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn2Q9R0A1 Haglr-201ENSMUST00000100000 2085 ntBASIC17.79■□□□□ 0.44
Clcn2Q9R0A1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Clcn2Q9R0A1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Clcn2Q9R0A1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Clcn2Q9R0A1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Clcn2Q9R0A1 Gm2399-201ENSMUST00000104944 225 ntBASIC17.79■□□□□ 0.44
Clcn2Q9R0A1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn2Q9R0A1 Gm11249-201ENSMUST00000117071 859 ntBASIC17.79■□□□□ 0.44
Clcn2Q9R0A1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Clcn2Q9R0A1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.79■□□□□ 0.44
Clcn2Q9R0A1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.79■□□□□ 0.44
Clcn2Q9R0A1 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.79■□□□□ 0.44
Clcn2Q9R0A1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn2Q9R0A1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Clcn2Q9R0A1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn2Q9R0A1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Clcn2Q9R0A1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn2Q9R0A1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn2Q9R0A1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.79■□□□□ 0.44
Clcn2Q9R0A1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn2Q9R0A1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Clcn2Q9R0A1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clcn2Q9R0A1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn2Q9R0A1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn2Q9R0A1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn2Q9R0A1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn2Q9R0A1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Clcn2Q9R0A1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn2Q9R0A1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn2Q9R0A1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn2Q9R0A1 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.78■□□□□ 0.44
Clcn2Q9R0A1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn2Q9R0A1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn2Q9R0A1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn2Q9R0A1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn2Q9R0A1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clcn2Q9R0A1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn2Q9R0A1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.77■□□□□ 0.44
Clcn2Q9R0A1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn2Q9R0A1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Clcn2Q9R0A1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn2Q9R0A1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.77■□□□□ 0.44
Clcn2Q9R0A1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn2Q9R0A1 Trmt13-210ENSMUST00000198454 880 ntBASIC17.77■□□□□ 0.44
Clcn2Q9R0A1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clcn2Q9R0A1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Clcn2Q9R0A1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Clcn2Q9R0A1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clcn2Q9R0A1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn2Q9R0A1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Clcn2Q9R0A1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn2Q9R0A1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn2Q9R0A1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn2Q9R0A1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn2Q9R0A1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
Clcn2Q9R0A1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn2Q9R0A1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn2Q9R0A1 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.76■□□□□ 0.43
Clcn2Q9R0A1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn2Q9R0A1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn2Q9R0A1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn2Q9R0A1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn2Q9R0A1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn2Q9R0A1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn2Q9R0A1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.76■□□□□ 0.43
Clcn2Q9R0A1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn2Q9R0A1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.76■□□□□ 0.43
Clcn2Q9R0A1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn2Q9R0A1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Clcn2Q9R0A1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.75■□□□□ 0.43
Clcn2Q9R0A1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 139.7 ms