Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Mir2861-201ENSMUST00000175539 82 ntBASIC15.19■□□□□ 0.02
Nubp1Q9R060 Gm6443-201ENSMUST00000203599 874 ntBASIC15.19■□□□□ 0.02
Nubp1Q9R060 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.19■□□□□ 0.02
Nubp1Q9R060 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nubp1Q9R060 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nubp1Q9R060 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nubp1Q9R060 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nubp1Q9R060 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nubp1Q9R060 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Nubp1Q9R060 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Nubp1Q9R060 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.18■□□□□ 0.02
Nubp1Q9R060 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nubp1Q9R060 Gm29518-201ENSMUST00000190858 372 ntBASIC15.18■□□□□ 0.02
Nubp1Q9R060 Gm36991-201ENSMUST00000191800 648 ntBASIC15.18■□□□□ 0.02
Nubp1Q9R060 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.18■□□□□ 0.02
Nubp1Q9R060 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nubp1Q9R060 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nubp1Q9R060 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nubp1Q9R060 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Nubp1Q9R060 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nubp1Q9R060 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nubp1Q9R060 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nubp1Q9R060 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nubp1Q9R060 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Nubp1Q9R060 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nubp1Q9R060 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Nubp1Q9R060 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nubp1Q9R060 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.17■□□□□ 0.02
Nubp1Q9R060 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nubp1Q9R060 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nubp1Q9R060 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.17■□□□□ 0.02
Nubp1Q9R060 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nubp1Q9R060 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Nubp1Q9R060 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nubp1Q9R060 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nubp1Q9R060 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nubp1Q9R060 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nubp1Q9R060 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nubp1Q9R060 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nubp1Q9R060 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nubp1Q9R060 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nubp1Q9R060 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nubp1Q9R060 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nubp1Q9R060 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Nubp1Q9R060 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nubp1Q9R060 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nubp1Q9R060 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.16■□□□□ 0.02
Nubp1Q9R060 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC15.16■□□□□ 0.02
Nubp1Q9R060 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nubp1Q9R060 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Nubp1Q9R060 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nubp1Q9R060 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nubp1Q9R060 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Nubp1Q9R060 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nubp1Q9R060 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Nubp1Q9R060 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.16■□□□□ 0.02
Nubp1Q9R060 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Gm25925-201ENSMUST00000158314 306 ntBASIC15.15■□□□□ 0.02
Nubp1Q9R060 Gm4974-201ENSMUST00000209974 875 ntBASIC15.15■□□□□ 0.02
Nubp1Q9R060 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Gm5867-201ENSMUST00000063197 592 ntBASIC15.15■□□□□ 0.02
Nubp1Q9R060 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nubp1Q9R060 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms