Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr2e3Q9QXZ7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Nr2e3Q9QXZ7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Nr2e3Q9QXZ7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr2e3Q9QXZ7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr2e3Q9QXZ7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nr2e3Q9QXZ7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nr2e3Q9QXZ7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Nr2e3Q9QXZ7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nr2e3Q9QXZ7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nr2e3Q9QXZ7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nr2e3Q9QXZ7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nr2e3Q9QXZ7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Nr2e3Q9QXZ7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Nr2e3Q9QXZ7 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nr2e3Q9QXZ7 Gm38027-201ENSMUST00000192315 235 ntBASIC19.69■□□□□ 0.74
Nr2e3Q9QXZ7 Gm3375-201ENSMUST00000203929 796 ntBASIC19.69■□□□□ 0.74
Nr2e3Q9QXZ7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nr2e3Q9QXZ7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Nr2e3Q9QXZ7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nr2e3Q9QXZ7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Nr2e3Q9QXZ7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nr2e3Q9QXZ7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr2e3Q9QXZ7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr2e3Q9QXZ7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr2e3Q9QXZ7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr2e3Q9QXZ7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr2e3Q9QXZ7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr2e3Q9QXZ7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr2e3Q9QXZ7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.68■□□□□ 0.74
Nr2e3Q9QXZ7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.68■□□□□ 0.74
Nr2e3Q9QXZ7 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.68■□□□□ 0.74
Nr2e3Q9QXZ7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Nr2e3Q9QXZ7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr2e3Q9QXZ7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr2e3Q9QXZ7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr2e3Q9QXZ7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr2e3Q9QXZ7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr2e3Q9QXZ7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.68■□□□□ 0.74
Nr2e3Q9QXZ7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nr2e3Q9QXZ7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr2e3Q9QXZ7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr2e3Q9QXZ7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr2e3Q9QXZ7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nr2e3Q9QXZ7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr2e3Q9QXZ7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr2e3Q9QXZ7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr2e3Q9QXZ7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.67■□□□□ 0.74
Nr2e3Q9QXZ7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr2e3Q9QXZ7 Gm37055-201ENSMUST00000191866 133 ntBASIC19.67■□□□□ 0.74
Nr2e3Q9QXZ7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr2e3Q9QXZ7 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.67■□□□□ 0.74
Nr2e3Q9QXZ7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
Nr2e3Q9QXZ7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nr2e3Q9QXZ7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr2e3Q9QXZ7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Nr2e3Q9QXZ7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr2e3Q9QXZ7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nr2e3Q9QXZ7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.66■□□□□ 0.74
Nr2e3Q9QXZ7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr2e3Q9QXZ7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Nr2e3Q9QXZ7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Nr2e3Q9QXZ7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr2e3Q9QXZ7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Nr2e3Q9QXZ7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr2e3Q9QXZ7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nr2e3Q9QXZ7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Nr2e3Q9QXZ7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Nr2e3Q9QXZ7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.66■□□□□ 0.74
Nr2e3Q9QXZ7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nr2e3Q9QXZ7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.66■□□□□ 0.74
Nr2e3Q9QXZ7 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nr2e3Q9QXZ7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr2e3Q9QXZ7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr2e3Q9QXZ7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr2e3Q9QXZ7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nr2e3Q9QXZ7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nr2e3Q9QXZ7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr2e3Q9QXZ7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr2e3Q9QXZ7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Nr2e3Q9QXZ7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nr2e3Q9QXZ7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.65■□□□□ 0.74
Nr2e3Q9QXZ7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.65■□□□□ 0.74
Nr2e3Q9QXZ7 Gm5417-201ENSMUST00000079706 384 ntBASIC19.65■□□□□ 0.74
Nr2e3Q9QXZ7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nr2e3Q9QXZ7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr2e3Q9QXZ7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr2e3Q9QXZ7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nr2e3Q9QXZ7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr2e3Q9QXZ7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr2e3Q9QXZ7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Nr2e3Q9QXZ7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Nr2e3Q9QXZ7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.64■□□□□ 0.73
Nr2e3Q9QXZ7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nr2e3Q9QXZ7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nr2e3Q9QXZ7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nr2e3Q9QXZ7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nr2e3Q9QXZ7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nr2e3Q9QXZ7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nr2e3Q9QXZ7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms