Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Scn5aQ9JJV9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn5aQ9JJV9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn5aQ9JJV9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Scn5aQ9JJV9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Scn5aQ9JJV9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scn5aQ9JJV9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scn5aQ9JJV9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scn5aQ9JJV9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.02■□□□□ 0.47
Scn5aQ9JJV9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn5aQ9JJV9 Gm24589-201ENSMUST00000116692 94 ntBASIC18.01■□□□□ 0.47
Scn5aQ9JJV9 Gm18115-201ENSMUST00000221209 621 ntBASIC18.01■□□□□ 0.47
Scn5aQ9JJV9 Mzt1-203ENSMUST00000227948 952 ntBASIC18.01■□□□□ 0.47
Scn5aQ9JJV9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn5aQ9JJV9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn5aQ9JJV9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Scn5aQ9JJV9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Scn5aQ9JJV9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn5aQ9JJV9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn5aQ9JJV9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn5aQ9JJV9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Scn5aQ9JJV9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn5aQ9JJV9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn5aQ9JJV9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.01■□□□□ 0.47
Scn5aQ9JJV9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Scn5aQ9JJV9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn5aQ9JJV9 Mir3081-201ENSMUST00000175305 84 ntBASIC18.01■□□□□ 0.47
Scn5aQ9JJV9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn5aQ9JJV9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn5aQ9JJV9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.01■□□□□ 0.47
Scn5aQ9JJV9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn5aQ9JJV9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scn5aQ9JJV9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn5aQ9JJV9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn5aQ9JJV9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn5aQ9JJV9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn5aQ9JJV9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn5aQ9JJV9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Scn5aQ9JJV9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn5aQ9JJV9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.99■□□□□ 0.47
Scn5aQ9JJV9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn5aQ9JJV9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.99■□□□□ 0.47
Scn5aQ9JJV9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scn5aQ9JJV9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn5aQ9JJV9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn5aQ9JJV9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.99■□□□□ 0.47
Scn5aQ9JJV9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn5aQ9JJV9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scn5aQ9JJV9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn5aQ9JJV9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.99■□□□□ 0.47
Scn5aQ9JJV9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.99■□□□□ 0.47
Scn5aQ9JJV9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.99■□□□□ 0.47
Scn5aQ9JJV9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn5aQ9JJV9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn5aQ9JJV9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn5aQ9JJV9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn5aQ9JJV9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Scn5aQ9JJV9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn5aQ9JJV9 Gm27742-201ENSMUST00000184667 60 ntBASIC17.98■□□□□ 0.47
Scn5aQ9JJV9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn5aQ9JJV9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn5aQ9JJV9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn5aQ9JJV9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Scn5aQ9JJV9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Scn5aQ9JJV9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.98■□□□□ 0.47
Scn5aQ9JJV9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.98■□□□□ 0.47
Scn5aQ9JJV9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn5aQ9JJV9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.98■□□□□ 0.47
Scn5aQ9JJV9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn5aQ9JJV9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Scn5aQ9JJV9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn5aQ9JJV9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.97■□□□□ 0.47
Scn5aQ9JJV9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scn5aQ9JJV9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn5aQ9JJV9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn5aQ9JJV9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn5aQ9JJV9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
Scn5aQ9JJV9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.97■□□□□ 0.47
Scn5aQ9JJV9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn5aQ9JJV9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Scn5aQ9JJV9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn5aQ9JJV9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn5aQ9JJV9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn5aQ9JJV9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Scn5aQ9JJV9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Scn5aQ9JJV9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Scn5aQ9JJV9 Gm6623-201ENSMUST00000173570 544 ntBASIC17.96■□□□□ 0.47
Scn5aQ9JJV9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scn5aQ9JJV9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.96■□□□□ 0.47
Scn5aQ9JJV9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scn5aQ9JJV9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scn5aQ9JJV9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn5aQ9JJV9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn5aQ9JJV9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scn5aQ9JJV9 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scn5aQ9JJV9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.96■□□□□ 0.47
Scn5aQ9JJV9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scn5aQ9JJV9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.96■□□□□ 0.47
Scn5aQ9JJV9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.96■□□□□ 0.47
Scn5aQ9JJV9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms