Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nup50Q9JIH2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Nup50Q9JIH2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nup50Q9JIH2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nup50Q9JIH2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nup50Q9JIH2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Nup50Q9JIH2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nup50Q9JIH2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nup50Q9JIH2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.41■□□□□ 0.54
Nup50Q9JIH2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nup50Q9JIH2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nup50Q9JIH2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nup50Q9JIH2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Nup50Q9JIH2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nup50Q9JIH2 Gm6576-201ENSMUST00000169678 883 ntBASIC18.41■□□□□ 0.54
Nup50Q9JIH2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Nup50Q9JIH2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nup50Q9JIH2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nup50Q9JIH2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nup50Q9JIH2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Nup50Q9JIH2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nup50Q9JIH2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nup50Q9JIH2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Nup50Q9JIH2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nup50Q9JIH2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nup50Q9JIH2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nup50Q9JIH2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nup50Q9JIH2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.4■□□□□ 0.54
Nup50Q9JIH2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nup50Q9JIH2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Nup50Q9JIH2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nup50Q9JIH2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Nup50Q9JIH2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nup50Q9JIH2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nup50Q9JIH2 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.39■□□□□ 0.54
Nup50Q9JIH2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nup50Q9JIH2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nup50Q9JIH2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Nup50Q9JIH2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nup50Q9JIH2 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.39■□□□□ 0.53
Nup50Q9JIH2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nup50Q9JIH2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nup50Q9JIH2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nup50Q9JIH2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nup50Q9JIH2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nup50Q9JIH2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Nup50Q9JIH2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nup50Q9JIH2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup50Q9JIH2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup50Q9JIH2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Nup50Q9JIH2 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.38■□□□□ 0.53
Nup50Q9JIH2 Gm10602-201ENSMUST00000098239 609 ntBASIC18.38■□□□□ 0.53
Nup50Q9JIH2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nup50Q9JIH2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
Nup50Q9JIH2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup50Q9JIH2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup50Q9JIH2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.38■□□□□ 0.53
Nup50Q9JIH2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nup50Q9JIH2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Nup50Q9JIH2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Nup50Q9JIH2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.37■□□□□ 0.53
Nup50Q9JIH2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup50Q9JIH2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup50Q9JIH2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup50Q9JIH2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.37■□□□□ 0.53
Nup50Q9JIH2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.37■□□□□ 0.53
Nup50Q9JIH2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup50Q9JIH2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup50Q9JIH2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup50Q9JIH2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup50Q9JIH2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup50Q9JIH2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup50Q9JIH2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup50Q9JIH2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nup50Q9JIH2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nup50Q9JIH2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup50Q9JIH2 Gm13158-201ENSMUST00000122007 736 ntBASIC18.36■□□□□ 0.53
Nup50Q9JIH2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nup50Q9JIH2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nup50Q9JIH2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup50Q9JIH2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.36■□□□□ 0.53
Nup50Q9JIH2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nup50Q9JIH2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup50Q9JIH2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup50Q9JIH2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup50Q9JIH2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nup50Q9JIH2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Nup50Q9JIH2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nup50Q9JIH2 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.35■□□□□ 0.53
Nup50Q9JIH2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup50Q9JIH2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup50Q9JIH2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup50Q9JIH2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup50Q9JIH2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Nup50Q9JIH2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nup50Q9JIH2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.35■□□□□ 0.53
Nup50Q9JIH2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.35■□□□□ 0.53
Nup50Q9JIH2 Gm27275-201ENSMUST00000184318 272 ntBASIC18.35■□□□□ 0.53
Nup50Q9JIH2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nup50Q9JIH2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms