Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn3Q9ES97 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Rtn3Q9ES97 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rtn3Q9ES97 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rtn3Q9ES97 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rtn3Q9ES97 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rtn3Q9ES97 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rtn3Q9ES97 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rtn3Q9ES97 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.54■□□□□ 0.56
Rtn3Q9ES97 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Rtn3Q9ES97 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.54■□□□□ 0.56
Rtn3Q9ES97 Gm6576-201ENSMUST00000169678 883 ntBASIC18.54■□□□□ 0.56
Rtn3Q9ES97 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.54■□□□□ 0.56
Rtn3Q9ES97 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rtn3Q9ES97 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.54■□□□□ 0.56
Rtn3Q9ES97 Mtag2-201ENSMUST00000058665 714 ntBASIC18.54■□□□□ 0.56
Rtn3Q9ES97 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rtn3Q9ES97 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.54■□□□□ 0.56
Rtn3Q9ES97 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rtn3Q9ES97 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rtn3Q9ES97 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rtn3Q9ES97 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtn3Q9ES97 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtn3Q9ES97 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.53■□□□□ 0.56
Rtn3Q9ES97 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.53■□□□□ 0.56
Rtn3Q9ES97 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rtn3Q9ES97 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rtn3Q9ES97 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtn3Q9ES97 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.53■□□□□ 0.56
Rtn3Q9ES97 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtn3Q9ES97 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtn3Q9ES97 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtn3Q9ES97 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtn3Q9ES97 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtn3Q9ES97 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rtn3Q9ES97 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtn3Q9ES97 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtn3Q9ES97 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtn3Q9ES97 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtn3Q9ES97 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtn3Q9ES97 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtn3Q9ES97 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtn3Q9ES97 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.52■□□□□ 0.56
Rtn3Q9ES97 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rtn3Q9ES97 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtn3Q9ES97 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.52■□□□□ 0.56
Rtn3Q9ES97 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.52■□□□□ 0.56
Rtn3Q9ES97 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Rtn3Q9ES97 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtn3Q9ES97 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rtn3Q9ES97 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rtn3Q9ES97 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.52■□□□□ 0.55
Rtn3Q9ES97 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rtn3Q9ES97 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn3Q9ES97 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Rtn3Q9ES97 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.51■□□□□ 0.55
Rtn3Q9ES97 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn3Q9ES97 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn3Q9ES97 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn3Q9ES97 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Rtn3Q9ES97 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.51■□□□□ 0.55
Rtn3Q9ES97 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn3Q9ES97 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn3Q9ES97 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.51■□□□□ 0.55
Rtn3Q9ES97 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn3Q9ES97 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn3Q9ES97 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn3Q9ES97 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn3Q9ES97 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn3Q9ES97 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn3Q9ES97 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn3Q9ES97 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.51■□□□□ 0.55
Rtn3Q9ES97 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rtn3Q9ES97 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.51■□□□□ 0.55
Rtn3Q9ES97 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn3Q9ES97 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn3Q9ES97 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn3Q9ES97 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn3Q9ES97 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.5■□□□□ 0.55
Rtn3Q9ES97 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rtn3Q9ES97 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn3Q9ES97 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn3Q9ES97 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn3Q9ES97 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn3Q9ES97 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn3Q9ES97 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.5■□□□□ 0.55
Rtn3Q9ES97 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.5■□□□□ 0.55
Rtn3Q9ES97 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.5■□□□□ 0.55
Rtn3Q9ES97 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rtn3Q9ES97 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn3Q9ES97 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rtn3Q9ES97 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn3Q9ES97 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn3Q9ES97 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rtn3Q9ES97 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn3Q9ES97 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn3Q9ES97 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn3Q9ES97 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn3Q9ES97 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Rtn3Q9ES97 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms