Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lime1Q9EQR5 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.17■□□□□ 0.02
Lime1Q9EQR5 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lime1Q9EQR5 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lime1Q9EQR5 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lime1Q9EQR5 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lime1Q9EQR5 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lime1Q9EQR5 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lime1Q9EQR5 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lime1Q9EQR5 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lime1Q9EQR5 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.16■□□□□ 0.02
Lime1Q9EQR5 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lime1Q9EQR5 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lime1Q9EQR5 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lime1Q9EQR5 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lime1Q9EQR5 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lime1Q9EQR5 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lime1Q9EQR5 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.16■□□□□ 0.02
Lime1Q9EQR5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lime1Q9EQR5 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.16■□□□□ 0.02
Lime1Q9EQR5 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lime1Q9EQR5 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lime1Q9EQR5 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lime1Q9EQR5 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Lime1Q9EQR5 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lime1Q9EQR5 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lime1Q9EQR5 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Lime1Q9EQR5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.16■□□□□ 0.02
Lime1Q9EQR5 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lime1Q9EQR5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lime1Q9EQR5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lime1Q9EQR5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lime1Q9EQR5 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Lime1Q9EQR5 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lime1Q9EQR5 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lime1Q9EQR5 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Lime1Q9EQR5 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lime1Q9EQR5 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.15■□□□□ 0.02
Lime1Q9EQR5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lime1Q9EQR5 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lime1Q9EQR5 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lime1Q9EQR5 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lime1Q9EQR5 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.15■□□□□ 0.02
Lime1Q9EQR5 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lime1Q9EQR5 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.15■□□□□ 0.02
Lime1Q9EQR5 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lime1Q9EQR5 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lime1Q9EQR5 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lime1Q9EQR5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lime1Q9EQR5 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lime1Q9EQR5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lime1Q9EQR5 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lime1Q9EQR5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lime1Q9EQR5 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lime1Q9EQR5 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lime1Q9EQR5 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lime1Q9EQR5 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.14■□□□□ 0.01
Lime1Q9EQR5 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lime1Q9EQR5 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lime1Q9EQR5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lime1Q9EQR5 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lime1Q9EQR5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lime1Q9EQR5 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lime1Q9EQR5 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.14■□□□□ 0.01
Lime1Q9EQR5 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.14■□□□□ 0.01
Lime1Q9EQR5 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lime1Q9EQR5 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lime1Q9EQR5 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Lime1Q9EQR5 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lime1Q9EQR5 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lime1Q9EQR5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lime1Q9EQR5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lime1Q9EQR5 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lime1Q9EQR5 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.13■□□□□ 0.01
Lime1Q9EQR5 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lime1Q9EQR5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.13■□□□□ 0.01
Lime1Q9EQR5 Gm15039-201ENSMUST00000118914 875 ntBASIC15.13■□□□□ 0.01
Lime1Q9EQR5 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.13■□□□□ 0.01
Lime1Q9EQR5 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Lime1Q9EQR5 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lime1Q9EQR5 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lime1Q9EQR5 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lime1Q9EQR5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Lime1Q9EQR5 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lime1Q9EQR5 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lime1Q9EQR5 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lime1Q9EQR5 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lime1Q9EQR5 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lime1Q9EQR5 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lime1Q9EQR5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lime1Q9EQR5 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.12■□□□□ 0.01
Lime1Q9EQR5 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lime1Q9EQR5 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lime1Q9EQR5 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lime1Q9EQR5 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lime1Q9EQR5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Lime1Q9EQR5 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lime1Q9EQR5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lime1Q9EQR5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lime1Q9EQR5 Gm18284-201ENSMUST00000172604 624 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms