Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.17■□□□□ 0.18
Cdc40Q9DC48 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.17■□□□□ 0.18
Cdc40Q9DC48 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdc40Q9DC48 Gm5417-201ENSMUST00000079706 384 ntBASIC16.17■□□□□ 0.18
Cdc40Q9DC48 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdc40Q9DC48 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cdc40Q9DC48 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Cdc40Q9DC48 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdc40Q9DC48 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdc40Q9DC48 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.17■□□□□ 0.18
Cdc40Q9DC48 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdc40Q9DC48 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdc40Q9DC48 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdc40Q9DC48 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdc40Q9DC48 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdc40Q9DC48 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
Cdc40Q9DC48 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdc40Q9DC48 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdc40Q9DC48 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdc40Q9DC48 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdc40Q9DC48 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.16■□□□□ 0.18
Cdc40Q9DC48 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdc40Q9DC48 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdc40Q9DC48 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdc40Q9DC48 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdc40Q9DC48 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdc40Q9DC48 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdc40Q9DC48 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdc40Q9DC48 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdc40Q9DC48 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdc40Q9DC48 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdc40Q9DC48 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdc40Q9DC48 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdc40Q9DC48 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Cdc40Q9DC48 Gm15375-201ENSMUST00000119510 849 ntBASIC16.15■□□□□ 0.18
Cdc40Q9DC48 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.15■□□□□ 0.18
Cdc40Q9DC48 Gm43183-201ENSMUST00000200632 547 ntBASIC16.15■□□□□ 0.18
Cdc40Q9DC48 Gm42545-201ENSMUST00000202755 922 ntBASIC16.15■□□□□ 0.18
Cdc40Q9DC48 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.15■□□□□ 0.18
Cdc40Q9DC48 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.15■□□□□ 0.18
Cdc40Q9DC48 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.15■□□□□ 0.18
Cdc40Q9DC48 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdc40Q9DC48 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdc40Q9DC48 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdc40Q9DC48 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdc40Q9DC48 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Cdc40Q9DC48 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cdc40Q9DC48 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Mir5122-201ENSMUST00000175004 89 ntBASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Gm7977-201ENSMUST00000193787 748 ntBASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdc40Q9DC48 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdc40Q9DC48 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdc40Q9DC48 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdc40Q9DC48 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdc40Q9DC48 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdc40Q9DC48 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.13■□□□□ 0.17
Cdc40Q9DC48 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdc40Q9DC48 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdc40Q9DC48 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdc40Q9DC48 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdc40Q9DC48 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.13■□□□□ 0.17
Cdc40Q9DC48 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdc40Q9DC48 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Cdc40Q9DC48 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdc40Q9DC48 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdc40Q9DC48 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdc40Q9DC48 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdc40Q9DC48 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdc40Q9DC48 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdc40Q9DC48 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdc40Q9DC48 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Cdc40Q9DC48 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdc40Q9DC48 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdc40Q9DC48 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms