Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf6Q9DBU5 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Rnf6Q9DBU5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Rnf6Q9DBU5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf6Q9DBU5 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.71■□□□□ 0.59
Rnf6Q9DBU5 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.71■□□□□ 0.59
Rnf6Q9DBU5 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf6Q9DBU5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf6Q9DBU5 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf6Q9DBU5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Rnf6Q9DBU5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf6Q9DBU5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.71■□□□□ 0.59
Rnf6Q9DBU5 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf6Q9DBU5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf6Q9DBU5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.71■□□□□ 0.59
Rnf6Q9DBU5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf6Q9DBU5 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.71■□□□□ 0.58
Rnf6Q9DBU5 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.7■□□□□ 0.58
Rnf6Q9DBU5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Rnf6Q9DBU5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf6Q9DBU5 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.7■□□□□ 0.58
Rnf6Q9DBU5 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf6Q9DBU5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.7■□□□□ 0.58
Rnf6Q9DBU5 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf6Q9DBU5 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf6Q9DBU5 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf6Q9DBU5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf6Q9DBU5 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf6Q9DBU5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf6Q9DBU5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf6Q9DBU5 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rnf6Q9DBU5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf6Q9DBU5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf6Q9DBU5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf6Q9DBU5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf6Q9DBU5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rnf6Q9DBU5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf6Q9DBU5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.69■□□□□ 0.58
Rnf6Q9DBU5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf6Q9DBU5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf6Q9DBU5 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf6Q9DBU5 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf6Q9DBU5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf6Q9DBU5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf6Q9DBU5 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf6Q9DBU5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rnf6Q9DBU5 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf6Q9DBU5 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.68■□□□□ 0.58
Rnf6Q9DBU5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf6Q9DBU5 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.68■□□□□ 0.58
Rnf6Q9DBU5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.68■□□□□ 0.58
Rnf6Q9DBU5 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf6Q9DBU5 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf6Q9DBU5 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf6Q9DBU5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf6Q9DBU5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Rnf6Q9DBU5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.67■□□□□ 0.58
Rnf6Q9DBU5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf6Q9DBU5 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Rnf6Q9DBU5 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.67■□□□□ 0.58
Rnf6Q9DBU5 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Rnf6Q9DBU5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf6Q9DBU5 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf6Q9DBU5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf6Q9DBU5 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf6Q9DBU5 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf6Q9DBU5 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf6Q9DBU5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf6Q9DBU5 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf6Q9DBU5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf6Q9DBU5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf6Q9DBU5 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf6Q9DBU5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf6Q9DBU5 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf6Q9DBU5 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf6Q9DBU5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf6Q9DBU5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf6Q9DBU5 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf6Q9DBU5 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.66■□□□□ 0.58
Rnf6Q9DBU5 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.66■□□□□ 0.58
Rnf6Q9DBU5 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.66■□□□□ 0.58
Rnf6Q9DBU5 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.66■□□□□ 0.58
Rnf6Q9DBU5 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rnf6Q9DBU5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf6Q9DBU5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf6Q9DBU5 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf6Q9DBU5 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf6Q9DBU5 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rnf6Q9DBU5 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf6Q9DBU5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf6Q9DBU5 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf6Q9DBU5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.66■□□□□ 0.58
Rnf6Q9DBU5 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Rnf6Q9DBU5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf6Q9DBU5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf6Q9DBU5 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf6Q9DBU5 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf6Q9DBU5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf6Q9DBU5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf6Q9DBU5 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms