Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp8Q9DB85 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp8Q9DB85 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp8Q9DB85 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp8Q9DB85 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp8Q9DB85 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp8Q9DB85 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp8Q9DB85 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.06■□□□□ 0.32
Rrp8Q9DB85 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp8Q9DB85 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp8Q9DB85 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp8Q9DB85 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rrp8Q9DB85 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp8Q9DB85 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rrp8Q9DB85 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp8Q9DB85 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rrp8Q9DB85 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp8Q9DB85 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rrp8Q9DB85 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp8Q9DB85 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.05■□□□□ 0.32
Rrp8Q9DB85 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.05■□□□□ 0.32
Rrp8Q9DB85 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp8Q9DB85 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp8Q9DB85 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rrp8Q9DB85 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp8Q9DB85 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp8Q9DB85 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rrp8Q9DB85 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp8Q9DB85 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp8Q9DB85 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.04■□□□□ 0.32
Rrp8Q9DB85 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp8Q9DB85 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rrp8Q9DB85 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp8Q9DB85 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp8Q9DB85 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp8Q9DB85 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.04■□□□□ 0.32
Rrp8Q9DB85 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp8Q9DB85 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp8Q9DB85 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp8Q9DB85 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.04■□□□□ 0.32
Rrp8Q9DB85 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp8Q9DB85 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rrp8Q9DB85 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp8Q9DB85 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rrp8Q9DB85 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp8Q9DB85 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.03■□□□□ 0.32
Rrp8Q9DB85 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp8Q9DB85 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp8Q9DB85 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp8Q9DB85 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp8Q9DB85 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp8Q9DB85 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp8Q9DB85 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp8Q9DB85 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.03■□□□□ 0.32
Rrp8Q9DB85 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp8Q9DB85 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp8Q9DB85 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp8Q9DB85 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp8Q9DB85 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rrp8Q9DB85 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp8Q9DB85 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp8Q9DB85 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp8Q9DB85 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp8Q9DB85 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp8Q9DB85 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp8Q9DB85 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rrp8Q9DB85 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rrp8Q9DB85 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rrp8Q9DB85 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rrp8Q9DB85 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rrp8Q9DB85 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rrp8Q9DB85 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rrp8Q9DB85 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Rrp8Q9DB85 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rrp8Q9DB85 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rrp8Q9DB85 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rrp8Q9DB85 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.02■□□□□ 0.32
Rrp8Q9DB85 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rrp8Q9DB85 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rrp8Q9DB85 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rrp8Q9DB85 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.02■□□□□ 0.32
Rrp8Q9DB85 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rrp8Q9DB85 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.02■□□□□ 0.32
Rrp8Q9DB85 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rrp8Q9DB85 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rrp8Q9DB85 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rrp8Q9DB85 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rrp8Q9DB85 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rrp8Q9DB85 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rrp8Q9DB85 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rrp8Q9DB85 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rrp8Q9DB85 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rrp8Q9DB85 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rrp8Q9DB85 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rrp8Q9DB85 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rrp8Q9DB85 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Rrp8Q9DB85 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.01■□□□□ 0.31
Rrp8Q9DB85 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.01■□□□□ 0.31
Rrp8Q9DB85 Gm26039-201ENSMUST00000158152 144 ntBASIC17.01■□□□□ 0.31
Rrp8Q9DB85 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms