Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
Ssmem1Q9D9Y8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.05■□□□□ 0
Ssmem1Q9D9Y8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Ssmem1Q9D9Y8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ssmem1Q9D9Y8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Ssmem1Q9D9Y8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ssmem1Q9D9Y8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ssmem1Q9D9Y8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssmem1Q9D9Y8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.05■□□□□ -0
Ssmem1Q9D9Y8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.05■□□□□ -0
Ssmem1Q9D9Y8 Gm3375-201ENSMUST00000203929 796 ntBASIC15.05■□□□□ -0
Ssmem1Q9D9Y8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.05■□□□□ -0
Ssmem1Q9D9Y8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssmem1Q9D9Y8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Ssmem1Q9D9Y8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ssmem1Q9D9Y8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssmem1Q9D9Y8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ssmem1Q9D9Y8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ssmem1Q9D9Y8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssmem1Q9D9Y8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ssmem1Q9D9Y8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ssmem1Q9D9Y8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssmem1Q9D9Y8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssmem1Q9D9Y8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Ssmem1Q9D9Y8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssmem1Q9D9Y8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ssmem1Q9D9Y8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ssmem1Q9D9Y8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ssmem1Q9D9Y8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ssmem1Q9D9Y8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ssmem1Q9D9Y8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ssmem1Q9D9Y8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ssmem1Q9D9Y8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ssmem1Q9D9Y8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ssmem1Q9D9Y8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ssmem1Q9D9Y8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ssmem1Q9D9Y8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.04■□□□□ -0
Ssmem1Q9D9Y8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.04■□□□□ -0
Ssmem1Q9D9Y8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ssmem1Q9D9Y8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.04■□□□□ -0
Ssmem1Q9D9Y8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ssmem1Q9D9Y8 Mir8112-201ENSMUST00000184382 131 ntBASIC15.04■□□□□ -0
Ssmem1Q9D9Y8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ssmem1Q9D9Y8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ssmem1Q9D9Y8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ssmem1Q9D9Y8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ssmem1Q9D9Y8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ssmem1Q9D9Y8 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.04■□□□□ -0
Ssmem1Q9D9Y8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ssmem1Q9D9Y8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ssmem1Q9D9Y8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ssmem1Q9D9Y8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ssmem1Q9D9Y8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssmem1Q9D9Y8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssmem1Q9D9Y8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssmem1Q9D9Y8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssmem1Q9D9Y8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssmem1Q9D9Y8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssmem1Q9D9Y8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Ssmem1Q9D9Y8 Gm12085-201ENSMUST00000119263 940 ntBASIC15.03■□□□□ -0
Ssmem1Q9D9Y8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.03■□□□□ -0
Ssmem1Q9D9Y8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ssmem1Q9D9Y8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssmem1Q9D9Y8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ssmem1Q9D9Y8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ssmem1Q9D9Y8 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.03■□□□□ -0
Ssmem1Q9D9Y8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ssmem1Q9D9Y8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.03■□□□□ -0
Ssmem1Q9D9Y8 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.03■□□□□ -0
Ssmem1Q9D9Y8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms