Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gtf3c6Q9D8P7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.59■□□□□ 0.57
Gtf3c6Q9D8P7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gtf3c6Q9D8P7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gtf3c6Q9D8P7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gtf3c6Q9D8P7 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.59■□□□□ 0.57
Gtf3c6Q9D8P7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gtf3c6Q9D8P7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.59■□□□□ 0.57
Gtf3c6Q9D8P7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gtf3c6Q9D8P7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Gtf3c6Q9D8P7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gtf3c6Q9D8P7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.59■□□□□ 0.57
Gtf3c6Q9D8P7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gtf3c6Q9D8P7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.58■□□□□ 0.57
Gtf3c6Q9D8P7 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Gtf3c6Q9D8P7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Gtf3c6Q9D8P7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Gtf3c6Q9D8P7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gtf3c6Q9D8P7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gtf3c6Q9D8P7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gtf3c6Q9D8P7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.58■□□□□ 0.56
Gtf3c6Q9D8P7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.58■□□□□ 0.56
Gtf3c6Q9D8P7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gtf3c6Q9D8P7 Gm42545-201ENSMUST00000202755 922 ntBASIC18.58■□□□□ 0.56
Gtf3c6Q9D8P7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.58■□□□□ 0.56
Gtf3c6Q9D8P7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gtf3c6Q9D8P7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
Gtf3c6Q9D8P7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gtf3c6Q9D8P7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gtf3c6Q9D8P7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gtf3c6Q9D8P7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gtf3c6Q9D8P7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gtf3c6Q9D8P7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gtf3c6Q9D8P7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gtf3c6Q9D8P7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gtf3c6Q9D8P7 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.57■□□□□ 0.56
Gtf3c6Q9D8P7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gtf3c6Q9D8P7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gtf3c6Q9D8P7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gtf3c6Q9D8P7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gtf3c6Q9D8P7 Gm37292-201ENSMUST00000192062 758 ntBASIC18.57■□□□□ 0.56
Gtf3c6Q9D8P7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gtf3c6Q9D8P7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gtf3c6Q9D8P7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Gtf3c6Q9D8P7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gtf3c6Q9D8P7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Gtf3c6Q9D8P7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gtf3c6Q9D8P7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gtf3c6Q9D8P7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gtf3c6Q9D8P7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Gtf3c6Q9D8P7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gtf3c6Q9D8P7 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.56■□□□□ 0.56
Gtf3c6Q9D8P7 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.56■□□□□ 0.56
Gtf3c6Q9D8P7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gtf3c6Q9D8P7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gtf3c6Q9D8P7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gtf3c6Q9D8P7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gtf3c6Q9D8P7 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gtf3c6Q9D8P7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gtf3c6Q9D8P7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gtf3c6Q9D8P7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gtf3c6Q9D8P7 Gm5643-201ENSMUST00000117081 966 ntBASIC18.55■□□□□ 0.56
Gtf3c6Q9D8P7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.55■□□□□ 0.56
Gtf3c6Q9D8P7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.55■□□□□ 0.56
Gtf3c6Q9D8P7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.55■□□□□ 0.56
Gtf3c6Q9D8P7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Gtf3c6Q9D8P7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gtf3c6Q9D8P7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gtf3c6Q9D8P7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gtf3c6Q9D8P7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gtf3c6Q9D8P7 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.55■□□□□ 0.56
Gtf3c6Q9D8P7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gtf3c6Q9D8P7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gtf3c6Q9D8P7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gtf3c6Q9D8P7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gtf3c6Q9D8P7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gtf3c6Q9D8P7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gtf3c6Q9D8P7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gtf3c6Q9D8P7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gtf3c6Q9D8P7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Gtf3c6Q9D8P7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gtf3c6Q9D8P7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gtf3c6Q9D8P7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gtf3c6Q9D8P7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gtf3c6Q9D8P7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gtf3c6Q9D8P7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gtf3c6Q9D8P7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gtf3c6Q9D8P7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gtf3c6Q9D8P7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c6Q9D8P7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c6Q9D8P7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Gtf3c6Q9D8P7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c6Q9D8P7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c6Q9D8P7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c6Q9D8P7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c6Q9D8P7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c6Q9D8P7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c6Q9D8P7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.53■□□□□ 0.56
Gtf3c6Q9D8P7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gtf3c6Q9D8P7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms