Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tmem54Q9D7S1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tmem54Q9D7S1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tmem54Q9D7S1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tmem54Q9D7S1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tmem54Q9D7S1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.25■□□□□ 0.03
Tmem54Q9D7S1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tmem54Q9D7S1 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.25■□□□□ 0.03
Tmem54Q9D7S1 Gm12085-201ENSMUST00000119263 940 ntBASIC15.25■□□□□ 0.03
Tmem54Q9D7S1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tmem54Q9D7S1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.25■□□□□ 0.03
Tmem54Q9D7S1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tmem54Q9D7S1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.25■□□□□ 0.03
Tmem54Q9D7S1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tmem54Q9D7S1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tmem54Q9D7S1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tmem54Q9D7S1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tmem54Q9D7S1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tmem54Q9D7S1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Tmem54Q9D7S1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.24■□□□□ 0.03
Tmem54Q9D7S1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tmem54Q9D7S1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tmem54Q9D7S1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tmem54Q9D7S1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Tmem54Q9D7S1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tmem54Q9D7S1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.24■□□□□ 0.03
Tmem54Q9D7S1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.24■□□□□ 0.03
Tmem54Q9D7S1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.24■□□□□ 0.03
Tmem54Q9D7S1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tmem54Q9D7S1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.24■□□□□ 0.03
Tmem54Q9D7S1 Odf3b-204ENSMUST00000227834 930 ntBASIC15.24■□□□□ 0.03
Tmem54Q9D7S1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tmem54Q9D7S1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tmem54Q9D7S1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tmem54Q9D7S1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tmem54Q9D7S1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tmem54Q9D7S1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tmem54Q9D7S1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.24■□□□□ 0.03
Tmem54Q9D7S1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Tmem54Q9D7S1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tmem54Q9D7S1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Tmem54Q9D7S1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tmem54Q9D7S1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tmem54Q9D7S1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.23■□□□□ 0.03
Tmem54Q9D7S1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tmem54Q9D7S1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Tmem54Q9D7S1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tmem54Q9D7S1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tmem54Q9D7S1 Gm21814-202ENSMUST00000203277 873 ntBASIC15.23■□□□□ 0.03
Tmem54Q9D7S1 Gm10252-201ENSMUST00000209541 832 ntBASIC15.23■□□□□ 0.03
Tmem54Q9D7S1 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.23■□□□□ 0.03
Tmem54Q9D7S1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tmem54Q9D7S1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Tmem54Q9D7S1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tmem54Q9D7S1 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.23■□□□□ 0.03
Tmem54Q9D7S1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.23■□□□□ 0.03
Tmem54Q9D7S1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tmem54Q9D7S1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tmem54Q9D7S1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tmem54Q9D7S1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tmem54Q9D7S1 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.22■□□□□ 0.03
Tmem54Q9D7S1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tmem54Q9D7S1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Tmem54Q9D7S1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tmem54Q9D7S1 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.22■□□□□ 0.03
Tmem54Q9D7S1 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.22■□□□□ 0.03
Tmem54Q9D7S1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tmem54Q9D7S1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Tmem54Q9D7S1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tmem54Q9D7S1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tmem54Q9D7S1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Tmem54Q9D7S1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tmem54Q9D7S1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tmem54Q9D7S1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.21■□□□□ 0.03
Tmem54Q9D7S1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Tmem54Q9D7S1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmem54Q9D7S1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmem54Q9D7S1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmem54Q9D7S1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmem54Q9D7S1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.21■□□□□ 0.03
Tmem54Q9D7S1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.21■□□□□ 0.03
Tmem54Q9D7S1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Tmem54Q9D7S1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmem54Q9D7S1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Tmem54Q9D7S1 Gm38027-201ENSMUST00000192315 235 ntBASIC15.21■□□□□ 0.03
Tmem54Q9D7S1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmem54Q9D7S1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmem54Q9D7S1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.21■□□□□ 0.03
Tmem54Q9D7S1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmem54Q9D7S1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tmem54Q9D7S1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tmem54Q9D7S1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms