Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpap3Q9D706 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpap3Q9D706 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpap3Q9D706 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpap3Q9D706 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpap3Q9D706 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpap3Q9D706 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpap3Q9D706 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.2■□□□□ 0.66
Rpap3Q9D706 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rpap3Q9D706 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Rpap3Q9D706 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.2■□□□□ 0.66
Rpap3Q9D706 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpap3Q9D706 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rpap3Q9D706 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.2■□□□□ 0.66
Rpap3Q9D706 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpap3Q9D706 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.2■□□□□ 0.66
Rpap3Q9D706 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rpap3Q9D706 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpap3Q9D706 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rpap3Q9D706 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.19■□□□□ 0.66
Rpap3Q9D706 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpap3Q9D706 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rpap3Q9D706 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpap3Q9D706 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Rpap3Q9D706 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rpap3Q9D706 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
Rpap3Q9D706 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.19■□□□□ 0.66
Rpap3Q9D706 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpap3Q9D706 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Rpap3Q9D706 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpap3Q9D706 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap3Q9D706 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap3Q9D706 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap3Q9D706 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap3Q9D706 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap3Q9D706 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap3Q9D706 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Rpap3Q9D706 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.18■□□□□ 0.66
Rpap3Q9D706 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap3Q9D706 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.18■□□□□ 0.66
Rpap3Q9D706 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap3Q9D706 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap3Q9D706 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap3Q9D706 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap3Q9D706 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap3Q9D706 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rpap3Q9D706 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.18■□□□□ 0.66
Rpap3Q9D706 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.18■□□□□ 0.66
Rpap3Q9D706 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpap3Q9D706 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpap3Q9D706 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpap3Q9D706 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rpap3Q9D706 Mir1668-201ENSMUST00000184114 107 ntBASIC19.17■□□□□ 0.66
Rpap3Q9D706 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.17■□□□□ 0.66
Rpap3Q9D706 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rpap3Q9D706 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpap3Q9D706 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rpap3Q9D706 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Rpap3Q9D706 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rpap3Q9D706 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpap3Q9D706 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpap3Q9D706 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpap3Q9D706 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpap3Q9D706 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Rpap3Q9D706 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpap3Q9D706 Grk6-206ENSMUST00000224995 2971 ntBASIC19.17■□□□□ 0.66
Rpap3Q9D706 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rpap3Q9D706 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rpap3Q9D706 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rpap3Q9D706 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
Rpap3Q9D706 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.16■□□□□ 0.66
Rpap3Q9D706 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.16■□□□□ 0.66
Rpap3Q9D706 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpap3Q9D706 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Rpap3Q9D706 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rpap3Q9D706 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpap3Q9D706 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Rpap3Q9D706 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.16■□□□□ 0.66
Rpap3Q9D706 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rpap3Q9D706 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpap3Q9D706 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpap3Q9D706 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpap3Q9D706 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.15■□□□□ 0.66
Rpap3Q9D706 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.15■□□□□ 0.66
Rpap3Q9D706 AA414768-201ENSMUST00000121924 1257 ntBASIC19.15■□□□□ 0.66
Rpap3Q9D706 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rpap3Q9D706 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.15■□□□□ 0.66
Rpap3Q9D706 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rpap3Q9D706 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpap3Q9D706 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpap3Q9D706 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpap3Q9D706 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rpap3Q9D706 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rpap3Q9D706 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpap3Q9D706 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rpap3Q9D706 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpap3Q9D706 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpap3Q9D706 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.14■□□□□ 0.65
Rpap3Q9D706 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.14■□□□□ 0.65
Rpap3Q9D706 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms