Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps33aQ9D2N9 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.5■□□□□ 0.55
Vps33aQ9D2N9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps33aQ9D2N9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps33aQ9D2N9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps33aQ9D2N9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps33aQ9D2N9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.49■□□□□ 0.55
Vps33aQ9D2N9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps33aQ9D2N9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.49■□□□□ 0.55
Vps33aQ9D2N9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps33aQ9D2N9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.49■□□□□ 0.55
Vps33aQ9D2N9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.49■□□□□ 0.55
Vps33aQ9D2N9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps33aQ9D2N9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps33aQ9D2N9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Vps33aQ9D2N9 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.49■□□□□ 0.55
Vps33aQ9D2N9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Vps33aQ9D2N9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vps33aQ9D2N9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps33aQ9D2N9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Vps33aQ9D2N9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps33aQ9D2N9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Vps33aQ9D2N9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps33aQ9D2N9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Vps33aQ9D2N9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps33aQ9D2N9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps33aQ9D2N9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Vps33aQ9D2N9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Vps33aQ9D2N9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vps33aQ9D2N9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vps33aQ9D2N9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vps33aQ9D2N9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps33aQ9D2N9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps33aQ9D2N9 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.48■□□□□ 0.55
Vps33aQ9D2N9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vps33aQ9D2N9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.48■□□□□ 0.55
Vps33aQ9D2N9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.48■□□□□ 0.55
Vps33aQ9D2N9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps33aQ9D2N9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps33aQ9D2N9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vps33aQ9D2N9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps33aQ9D2N9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps33aQ9D2N9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.48■□□□□ 0.55
Vps33aQ9D2N9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps33aQ9D2N9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Vps33aQ9D2N9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps33aQ9D2N9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps33aQ9D2N9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps33aQ9D2N9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps33aQ9D2N9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps33aQ9D2N9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps33aQ9D2N9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps33aQ9D2N9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.47■□□□□ 0.55
Vps33aQ9D2N9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps33aQ9D2N9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps33aQ9D2N9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.47■□□□□ 0.55
Vps33aQ9D2N9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps33aQ9D2N9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps33aQ9D2N9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps33aQ9D2N9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps33aQ9D2N9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.47■□□□□ 0.55
Vps33aQ9D2N9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps33aQ9D2N9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps33aQ9D2N9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps33aQ9D2N9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.47■□□□□ 0.55
Vps33aQ9D2N9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps33aQ9D2N9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps33aQ9D2N9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps33aQ9D2N9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
Vps33aQ9D2N9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps33aQ9D2N9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.46■□□□□ 0.55
Vps33aQ9D2N9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.46■□□□□ 0.55
Vps33aQ9D2N9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.46■□□□□ 0.55
Vps33aQ9D2N9 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.46■□□□□ 0.55
Vps33aQ9D2N9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps33aQ9D2N9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.46■□□□□ 0.55
Vps33aQ9D2N9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Vps33aQ9D2N9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps33aQ9D2N9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps33aQ9D2N9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps33aQ9D2N9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps33aQ9D2N9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps33aQ9D2N9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps33aQ9D2N9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Vps33aQ9D2N9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps33aQ9D2N9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.46■□□□□ 0.55
Vps33aQ9D2N9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps33aQ9D2N9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps33aQ9D2N9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.46■□□□□ 0.55
Vps33aQ9D2N9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Vps33aQ9D2N9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.54
Vps33aQ9D2N9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vps33aQ9D2N9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps33aQ9D2N9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps33aQ9D2N9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps33aQ9D2N9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vps33aQ9D2N9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vps33aQ9D2N9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vps33aQ9D2N9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vps33aQ9D2N9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms