Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Gm7230-201ENSMUST00000173026 815 ntBASIC18.71■□□□□ 0.59
Lysmd1Q9D0E3 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.71■□□□□ 0.59
Lysmd1Q9D0E3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lysmd1Q9D0E3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lysmd1Q9D0E3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lysmd1Q9D0E3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lysmd1Q9D0E3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lysmd1Q9D0E3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Lysmd1Q9D0E3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lysmd1Q9D0E3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lysmd1Q9D0E3 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.7■□□□□ 0.58
Lysmd1Q9D0E3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lysmd1Q9D0E3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lysmd1Q9D0E3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC18.7■□□□□ 0.58
Lysmd1Q9D0E3 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Lysmd1Q9D0E3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Lysmd1Q9D0E3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC18.7■□□□□ 0.58
Lysmd1Q9D0E3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lysmd1Q9D0E3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Lysmd1Q9D0E3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Lysmd1Q9D0E3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lysmd1Q9D0E3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Lysmd1Q9D0E3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lysmd1Q9D0E3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lysmd1Q9D0E3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lysmd1Q9D0E3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Lysmd1Q9D0E3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Lysmd1Q9D0E3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd1Q9D0E3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd1Q9D0E3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Lysmd1Q9D0E3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd1Q9D0E3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd1Q9D0E3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd1Q9D0E3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd1Q9D0E3 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Lysmd1Q9D0E3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd1Q9D0E3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.69■□□□□ 0.58
Lysmd1Q9D0E3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd1Q9D0E3 AC140375.2-201ENSMUST00000225283 584 ntBASIC18.69■□□□□ 0.58
Lysmd1Q9D0E3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd1Q9D0E3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd1Q9D0E3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd1Q9D0E3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd1Q9D0E3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd1Q9D0E3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lysmd1Q9D0E3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.68■□□□□ 0.58
Lysmd1Q9D0E3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.68■□□□□ 0.58
Lysmd1Q9D0E3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
Lysmd1Q9D0E3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.68■□□□□ 0.58
Lysmd1Q9D0E3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lysmd1Q9D0E3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.68■□□□□ 0.58
Lysmd1Q9D0E3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC18.68■□□□□ 0.58
Lysmd1Q9D0E3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lysmd1Q9D0E3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lysmd1Q9D0E3 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.68■□□□□ 0.58
Lysmd1Q9D0E3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lysmd1Q9D0E3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lysmd1Q9D0E3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.67■□□□□ 0.58
Lysmd1Q9D0E3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lysmd1Q9D0E3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lysmd1Q9D0E3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lysmd1Q9D0E3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lysmd1Q9D0E3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lysmd1Q9D0E3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.67■□□□□ 0.58
Lysmd1Q9D0E3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lysmd1Q9D0E3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.67■□□□□ 0.58
Lysmd1Q9D0E3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.67■□□□□ 0.58
Lysmd1Q9D0E3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Lysmd1Q9D0E3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.67■□□□□ 0.58
Lysmd1Q9D0E3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.67■□□□□ 0.58
Lysmd1Q9D0E3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.67■□□□□ 0.58
Lysmd1Q9D0E3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Lysmd1Q9D0E3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lysmd1Q9D0E3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Lysmd1Q9D0E3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.66■□□□□ 0.58
Lysmd1Q9D0E3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lysmd1Q9D0E3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lysmd1Q9D0E3 Gm25990-201ENSMUST00000102440 86 ntBASIC18.66■□□□□ 0.58
Lysmd1Q9D0E3 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.66■□□□□ 0.58
Lysmd1Q9D0E3 Gm13312-201ENSMUST00000119631 718 ntBASIC18.66■□□□□ 0.58
Lysmd1Q9D0E3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lysmd1Q9D0E3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.66■□□□□ 0.58
Lysmd1Q9D0E3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lysmd1Q9D0E3 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Lysmd1Q9D0E3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Lysmd1Q9D0E3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lysmd1Q9D0E3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lysmd1Q9D0E3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lysmd1Q9D0E3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.65■□□□□ 0.58
Lysmd1Q9D0E3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lysmd1Q9D0E3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lysmd1Q9D0E3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lysmd1Q9D0E3 Gm11336-201ENSMUST00000118168 334 ntBASIC18.65■□□□□ 0.58
Lysmd1Q9D0E3 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.65■□□□□ 0.58
Lysmd1Q9D0E3 Gm20949-201ENSMUST00000206478 952 ntBASIC18.65■□□□□ 0.58
Lysmd1Q9D0E3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lysmd1Q9D0E3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lysmd1Q9D0E3 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.65■□□□□ 0.58
Lysmd1Q9D0E3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.65■□□□□ 0.58
Lysmd1Q9D0E3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms