Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Gm21814-202ENSMUST00000203277 873 ntBASIC14.5□□□□□ -0.09
Ssbp3Q9D032 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssbp3Q9D032 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ssbp3Q9D032 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.5□□□□□ -0.09
Ssbp3Q9D032 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssbp3Q9D032 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ssbp3Q9D032 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ssbp3Q9D032 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssbp3Q9D032 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssbp3Q9D032 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssbp3Q9D032 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ssbp3Q9D032 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Gm15565-201ENSMUST00000118890 427 ntBASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ssbp3Q9D032 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Fst-202ENSMUST00000223640 2612 ntBASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ssbp3Q9D032 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssbp3Q9D032 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssbp3Q9D032 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssbp3Q9D032 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ssbp3Q9D032 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.47□□□□□ -0.09
Ssbp3Q9D032 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssbp3Q9D032 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ssbp3Q9D032 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.47□□□□□ -0.09
Ssbp3Q9D032 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.47□□□□□ -0.09
Ssbp3Q9D032 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssbp3Q9D032 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.47□□□□□ -0.09
Ssbp3Q9D032 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.47□□□□□ -0.09
Ssbp3Q9D032 Gm4974-201ENSMUST00000209974 875 ntBASIC14.47□□□□□ -0.09
Ssbp3Q9D032 Gm30025-201ENSMUST00000218555 728 ntBASIC14.47□□□□□ -0.09
Ssbp3Q9D032 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssbp3Q9D032 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssbp3Q9D032 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssbp3Q9D032 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ssbp3Q9D032 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssbp3Q9D032 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssbp3Q9D032 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ssbp3Q9D032 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms