Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.96■□□□□ 0.47
Snf8Q9CZ28 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Snf8Q9CZ28 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Snf8Q9CZ28 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Snf8Q9CZ28 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Snf8Q9CZ28 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.96■□□□□ 0.46
Snf8Q9CZ28 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snf8Q9CZ28 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snf8Q9CZ28 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snf8Q9CZ28 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snf8Q9CZ28 Gm7291-201ENSMUST00000199147 382 ntBASIC17.95■□□□□ 0.46
Snf8Q9CZ28 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snf8Q9CZ28 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snf8Q9CZ28 Gm6365-201ENSMUST00000054711 744 ntBASIC17.95■□□□□ 0.46
Snf8Q9CZ28 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snf8Q9CZ28 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Snf8Q9CZ28 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snf8Q9CZ28 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Snf8Q9CZ28 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Snf8Q9CZ28 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Snf8Q9CZ28 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.94■□□□□ 0.46
Snf8Q9CZ28 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Snf8Q9CZ28 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Snf8Q9CZ28 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Snf8Q9CZ28 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Snf8Q9CZ28 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Snf8Q9CZ28 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Snf8Q9CZ28 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Snf8Q9CZ28 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Snf8Q9CZ28 Gm26571-201ENSMUST00000181399 666 ntBASIC17.94■□□□□ 0.46
Snf8Q9CZ28 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Snf8Q9CZ28 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Snf8Q9CZ28 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Snf8Q9CZ28 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.94■□□□□ 0.46
Snf8Q9CZ28 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Snf8Q9CZ28 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Snf8Q9CZ28 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Snf8Q9CZ28 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Snf8Q9CZ28 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Snf8Q9CZ28 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Snf8Q9CZ28 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.93■□□□□ 0.46
Snf8Q9CZ28 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Snf8Q9CZ28 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Snf8Q9CZ28 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.93■□□□□ 0.46
Snf8Q9CZ28 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Snf8Q9CZ28 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Snf8Q9CZ28 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Snf8Q9CZ28 Zfp783-201ENSMUST00000095946 670 ntBASIC17.93■□□□□ 0.46
Snf8Q9CZ28 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Snf8Q9CZ28 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.93■□□□□ 0.46
Snf8Q9CZ28 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Snf8Q9CZ28 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Snf8Q9CZ28 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Snf8Q9CZ28 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Snf8Q9CZ28 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Snf8Q9CZ28 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Snf8Q9CZ28 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Snf8Q9CZ28 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Snf8Q9CZ28 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Snf8Q9CZ28 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Snf8Q9CZ28 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Snf8Q9CZ28 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Snf8Q9CZ28 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Snf8Q9CZ28 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Snf8Q9CZ28 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Snf8Q9CZ28 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Snf8Q9CZ28 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.91■□□□□ 0.46
Snf8Q9CZ28 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Snf8Q9CZ28 Haglr-201ENSMUST00000100000 2085 ntBASIC17.91■□□□□ 0.46
Snf8Q9CZ28 Gm10849-201ENSMUST00000100397 618 ntBASIC17.91■□□□□ 0.46
Snf8Q9CZ28 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Snf8Q9CZ28 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Snf8Q9CZ28 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.91■□□□□ 0.46
Snf8Q9CZ28 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Snf8Q9CZ28 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Snf8Q9CZ28 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Snf8Q9CZ28 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Snf8Q9CZ28 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Snf8Q9CZ28 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Snf8Q9CZ28 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Snf8Q9CZ28 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.91■□□□□ 0.46
Snf8Q9CZ28 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Snf8Q9CZ28 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Snf8Q9CZ28 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Snf8Q9CZ28 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.91■□□□□ 0.46
Snf8Q9CZ28 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Snf8Q9CZ28 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.9■□□□□ 0.46
Snf8Q9CZ28 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Snf8Q9CZ28 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Snf8Q9CZ28 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Snf8Q9CZ28 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Snf8Q9CZ28 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Snf8Q9CZ28 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Snf8Q9CZ28 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Snf8Q9CZ28 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Snf8Q9CZ28 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Snf8Q9CZ28 Gm42569-201ENSMUST00000200539 472 ntBASIC17.9■□□□□ 0.46
Snf8Q9CZ28 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.9■□□□□ 0.46
Snf8Q9CZ28 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.9■□□□□ 0.46
Snf8Q9CZ28 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms