Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hdhd3Q9CYW4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.22□□□□□ -0.13
Hdhd3Q9CYW4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.22□□□□□ -0.13
Hdhd3Q9CYW4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hdhd3Q9CYW4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hdhd3Q9CYW4 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdhd3Q9CYW4 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hdhd3Q9CYW4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hdhd3Q9CYW4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.22□□□□□ -0.13
Hdhd3Q9CYW4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdhd3Q9CYW4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Hdhd3Q9CYW4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdhd3Q9CYW4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Hdhd3Q9CYW4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Hdhd3Q9CYW4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.21□□□□□ -0.13
Hdhd3Q9CYW4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hdhd3Q9CYW4 Gm12821-201ENSMUST00000120022 600 ntBASIC14.21□□□□□ -0.13
Hdhd3Q9CYW4 Gm22325-201ENSMUST00000158904 308 ntBASIC14.21□□□□□ -0.13
Hdhd3Q9CYW4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hdhd3Q9CYW4 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.21□□□□□ -0.13
Hdhd3Q9CYW4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdhd3Q9CYW4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdhd3Q9CYW4 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Hdhd3Q9CYW4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Hdhd3Q9CYW4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hdhd3Q9CYW4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hdhd3Q9CYW4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Hdhd3Q9CYW4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hdhd3Q9CYW4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hdhd3Q9CYW4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hdhd3Q9CYW4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hdhd3Q9CYW4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hdhd3Q9CYW4 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.19□□□□□ -0.14
Hdhd3Q9CYW4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdhd3Q9CYW4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Hdhd3Q9CYW4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Hdhd3Q9CYW4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hdhd3Q9CYW4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hdhd3Q9CYW4 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Hdhd3Q9CYW4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdhd3Q9CYW4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdhd3Q9CYW4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdhd3Q9CYW4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.19□□□□□ -0.14
Hdhd3Q9CYW4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdhd3Q9CYW4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdhd3Q9CYW4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdhd3Q9CYW4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.19□□□□□ -0.14
Hdhd3Q9CYW4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hdhd3Q9CYW4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Hdhd3Q9CYW4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdhd3Q9CYW4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdhd3Q9CYW4 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms