Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Mir6982-201ENSMUST00000184354 68 ntBASIC18.14■□□□□ 0.49
Rnf135Q9CWS1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf135Q9CWS1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.14■□□□□ 0.49
Rnf135Q9CWS1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf135Q9CWS1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.14■□□□□ 0.49
Rnf135Q9CWS1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rnf135Q9CWS1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
Rnf135Q9CWS1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf135Q9CWS1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf135Q9CWS1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf135Q9CWS1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rnf135Q9CWS1 Flg-201ENSMUST00000050758 1488 ntBASIC18.14■□□□□ 0.49
Rnf135Q9CWS1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf135Q9CWS1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.13■□□□□ 0.49
Rnf135Q9CWS1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf135Q9CWS1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf135Q9CWS1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf135Q9CWS1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rnf135Q9CWS1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf135Q9CWS1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf135Q9CWS1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rnf135Q9CWS1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf135Q9CWS1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf135Q9CWS1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf135Q9CWS1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.13■□□□□ 0.49
Rnf135Q9CWS1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.13■□□□□ 0.49
Rnf135Q9CWS1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf135Q9CWS1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf135Q9CWS1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf135Q9CWS1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.13■□□□□ 0.49
Rnf135Q9CWS1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.13■□□□□ 0.49
Rnf135Q9CWS1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf135Q9CWS1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf135Q9CWS1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf135Q9CWS1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf135Q9CWS1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf135Q9CWS1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf135Q9CWS1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf135Q9CWS1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf135Q9CWS1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf135Q9CWS1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.12■□□□□ 0.49
Rnf135Q9CWS1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.12■□□□□ 0.49
Rnf135Q9CWS1 Mir2861-201ENSMUST00000175539 82 ntBASIC18.12■□□□□ 0.49
Rnf135Q9CWS1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf135Q9CWS1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf135Q9CWS1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf135Q9CWS1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Rnf135Q9CWS1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Rnf135Q9CWS1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf135Q9CWS1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rnf135Q9CWS1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf135Q9CWS1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf135Q9CWS1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rnf135Q9CWS1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.12■□□□□ 0.49
Rnf135Q9CWS1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf135Q9CWS1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf135Q9CWS1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Mir8112-201ENSMUST00000184382 131 ntBASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf135Q9CWS1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf135Q9CWS1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf135Q9CWS1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rnf135Q9CWS1 Gm11927-201ENSMUST00000118472 759 ntBASIC18.1■□□□□ 0.49
Rnf135Q9CWS1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.1■□□□□ 0.49
Rnf135Q9CWS1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.1■□□□□ 0.49
Rnf135Q9CWS1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Rnf135Q9CWS1 Gm27275-201ENSMUST00000184318 272 ntBASIC18.1■□□□□ 0.49
Rnf135Q9CWS1 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.1■□□□□ 0.49
Rnf135Q9CWS1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf135Q9CWS1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rnf135Q9CWS1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Rnf135Q9CWS1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf135Q9CWS1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms