Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lrrc40Q9CRC8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lrrc40Q9CRC8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lrrc40Q9CRC8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Lrrc40Q9CRC8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrc40Q9CRC8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrc40Q9CRC8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrc40Q9CRC8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrc40Q9CRC8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Lrrc40Q9CRC8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.31■□□□□ 0.36
Lrrc40Q9CRC8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.31■□□□□ 0.36
Lrrc40Q9CRC8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrc40Q9CRC8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.31■□□□□ 0.36
Lrrc40Q9CRC8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrc40Q9CRC8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrc40Q9CRC8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrc40Q9CRC8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrc40Q9CRC8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrc40Q9CRC8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrc40Q9CRC8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lrrc40Q9CRC8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Lrrc40Q9CRC8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Lrrc40Q9CRC8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrc40Q9CRC8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrc40Q9CRC8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.3■□□□□ 0.36
Lrrc40Q9CRC8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.3■□□□□ 0.36
Lrrc40Q9CRC8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrc40Q9CRC8 Gm27275-201ENSMUST00000184318 272 ntBASIC17.3■□□□□ 0.36
Lrrc40Q9CRC8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Lrrc40Q9CRC8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrc40Q9CRC8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrc40Q9CRC8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lrrc40Q9CRC8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Lrrc40Q9CRC8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc40Q9CRC8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc40Q9CRC8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc40Q9CRC8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.29■□□□□ 0.36
Lrrc40Q9CRC8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc40Q9CRC8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Lrrc40Q9CRC8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc40Q9CRC8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.29■□□□□ 0.36
Lrrc40Q9CRC8 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.29■□□□□ 0.36
Lrrc40Q9CRC8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc40Q9CRC8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc40Q9CRC8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc40Q9CRC8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.29■□□□□ 0.36
Lrrc40Q9CRC8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc40Q9CRC8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc40Q9CRC8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc40Q9CRC8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc40Q9CRC8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc40Q9CRC8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc40Q9CRC8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Lrrc40Q9CRC8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.29■□□□□ 0.36
Lrrc40Q9CRC8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Gm18666-201ENSMUST00000190039 958 ntBASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Gm18025-201ENSMUST00000221733 862 ntBASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.28■□□□□ 0.36
Lrrc40Q9CRC8 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.27■□□□□ 0.36
Lrrc40Q9CRC8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc40Q9CRC8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.27■□□□□ 0.36
Lrrc40Q9CRC8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc40Q9CRC8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc40Q9CRC8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc40Q9CRC8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.27■□□□□ 0.36
Lrrc40Q9CRC8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc40Q9CRC8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc40Q9CRC8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc40Q9CRC8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Lrrc40Q9CRC8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Lrrc40Q9CRC8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lrrc40Q9CRC8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Lrrc40Q9CRC8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lrrc40Q9CRC8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Lrrc40Q9CRC8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lrrc40Q9CRC8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms