Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc43Q9CR29 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc43Q9CR29 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc43Q9CR29 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc43Q9CR29 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc43Q9CR29 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc43Q9CR29 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc43Q9CR29 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc43Q9CR29 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc43Q9CR29 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc43Q9CR29 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.37■□□□□ 0.69
Ccdc43Q9CR29 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc43Q9CR29 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc43Q9CR29 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccdc43Q9CR29 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc43Q9CR29 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc43Q9CR29 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc43Q9CR29 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Ccdc43Q9CR29 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc43Q9CR29 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc43Q9CR29 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc43Q9CR29 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc43Q9CR29 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc43Q9CR29 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc43Q9CR29 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc43Q9CR29 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc43Q9CR29 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc43Q9CR29 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc43Q9CR29 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc43Q9CR29 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc43Q9CR29 Gm12896-201ENSMUST00000118430 226 ntBASIC19.36■□□□□ 0.69
Ccdc43Q9CR29 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc43Q9CR29 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ccdc43Q9CR29 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.36■□□□□ 0.69
Ccdc43Q9CR29 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc43Q9CR29 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc43Q9CR29 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc43Q9CR29 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Ccdc43Q9CR29 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc43Q9CR29 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc43Q9CR29 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc43Q9CR29 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc43Q9CR29 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc43Q9CR29 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc43Q9CR29 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc43Q9CR29 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc43Q9CR29 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.35■□□□□ 0.69
Ccdc43Q9CR29 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc43Q9CR29 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.35■□□□□ 0.69
Ccdc43Q9CR29 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc43Q9CR29 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.35■□□□□ 0.69
Ccdc43Q9CR29 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.35■□□□□ 0.69
Ccdc43Q9CR29 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc43Q9CR29 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc43Q9CR29 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc43Q9CR29 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc43Q9CR29 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc43Q9CR29 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc43Q9CR29 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc43Q9CR29 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc43Q9CR29 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc43Q9CR29 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc43Q9CR29 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Ccdc43Q9CR29 Gm11927-201ENSMUST00000118472 759 ntBASIC19.34■□□□□ 0.69
Ccdc43Q9CR29 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc43Q9CR29 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.34■□□□□ 0.69
Ccdc43Q9CR29 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.34■□□□□ 0.69
Ccdc43Q9CR29 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc43Q9CR29 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc43Q9CR29 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc43Q9CR29 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.34■□□□□ 0.69
Ccdc43Q9CR29 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc43Q9CR29 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc43Q9CR29 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc43Q9CR29 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc43Q9CR29 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc43Q9CR29 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc43Q9CR29 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Ccdc43Q9CR29 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc43Q9CR29 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc43Q9CR29 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc43Q9CR29 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ccdc43Q9CR29 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.33■□□□□ 0.68
Ccdc43Q9CR29 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.33■□□□□ 0.68
Ccdc43Q9CR29 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc43Q9CR29 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc43Q9CR29 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.33■□□□□ 0.68
Ccdc43Q9CR29 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc43Q9CR29 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc43Q9CR29 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc43Q9CR29 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ccdc43Q9CR29 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc43Q9CR29 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc43Q9CR29 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.32■□□□□ 0.68
Ccdc43Q9CR29 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc43Q9CR29 Gm29257-201ENSMUST00000186115 639 ntBASIC19.32■□□□□ 0.68
Ccdc43Q9CR29 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.32■□□□□ 0.68
Ccdc43Q9CR29 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc43Q9CR29 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc43Q9CR29 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms