Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm7Q9CQQ8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm7Q9CQQ8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm7Q9CQQ8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm7Q9CQQ8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Gm10231-201ENSMUST00000181584 441 ntBASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Gm10175-202ENSMUST00000208752 441 ntBASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Idnk-204ENSMUST00000226010 1898 ntBASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Lsm7Q9CQQ8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 Gm2274-201ENSMUST00000184539 609 ntBASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 Gm18959-201ENSMUST00000208954 655 ntBASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lsm7Q9CQQ8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm7Q9CQQ8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm7Q9CQQ8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm7Q9CQQ8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.61■□□□□ 0.41
Lsm7Q9CQQ8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm7Q9CQQ8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm7Q9CQQ8 Gm7638-201ENSMUST00000121348 967 ntBASIC17.61■□□□□ 0.41
Lsm7Q9CQQ8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Lsm7Q9CQQ8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.61■□□□□ 0.41
Lsm7Q9CQQ8 Gm37025-201ENSMUST00000195159 829 ntBASIC17.61■□□□□ 0.41
Lsm7Q9CQQ8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Lsm7Q9CQQ8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm7Q9CQQ8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm7Q9CQQ8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Lsm7Q9CQQ8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm7Q9CQQ8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm7Q9CQQ8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm7Q9CQQ8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.6■□□□□ 0.41
Lsm7Q9CQQ8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm7Q9CQQ8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm7Q9CQQ8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm7Q9CQQ8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm7Q9CQQ8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm7Q9CQQ8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm7Q9CQQ8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Lsm7Q9CQQ8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Lsm7Q9CQQ8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm7Q9CQQ8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm7Q9CQQ8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm7Q9CQQ8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.6■□□□□ 0.41
Lsm7Q9CQQ8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm7Q9CQQ8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Lsm7Q9CQQ8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm7Q9CQQ8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm7Q9CQQ8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Lsm7Q9CQQ8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm7Q9CQQ8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm7Q9CQQ8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm7Q9CQQ8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.59■□□□□ 0.41
Lsm7Q9CQQ8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm7Q9CQQ8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms