Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim33Q99PP7 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim33Q99PP7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim33Q99PP7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim33Q99PP7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim33Q99PP7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim33Q99PP7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim33Q99PP7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim33Q99PP7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim33Q99PP7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim33Q99PP7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim33Q99PP7 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.24■□□□□ 0.35
Trim33Q99PP7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim33Q99PP7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim33Q99PP7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim33Q99PP7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim33Q99PP7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim33Q99PP7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim33Q99PP7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim33Q99PP7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim33Q99PP7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim33Q99PP7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trim33Q99PP7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
Trim33Q99PP7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim33Q99PP7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim33Q99PP7 Gm15378-201ENSMUST00000121894 207 ntBASIC17.24■□□□□ 0.35
Trim33Q99PP7 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim33Q99PP7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim33Q99PP7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim33Q99PP7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.24■□□□□ 0.35
Trim33Q99PP7 Gm42545-201ENSMUST00000202755 922 ntBASIC17.24■□□□□ 0.35
Trim33Q99PP7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.24■□□□□ 0.35
Trim33Q99PP7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim33Q99PP7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim33Q99PP7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim33Q99PP7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim33Q99PP7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim33Q99PP7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trim33Q99PP7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim33Q99PP7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim33Q99PP7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trim33Q99PP7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim33Q99PP7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim33Q99PP7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim33Q99PP7 Gm10418-201ENSMUST00000100943 576 ntBASIC17.23■□□□□ 0.35
Trim33Q99PP7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim33Q99PP7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim33Q99PP7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim33Q99PP7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trim33Q99PP7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim33Q99PP7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim33Q99PP7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim33Q99PP7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim33Q99PP7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim33Q99PP7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim33Q99PP7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim33Q99PP7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim33Q99PP7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim33Q99PP7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Trim33Q99PP7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim33Q99PP7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim33Q99PP7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim33Q99PP7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim33Q99PP7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim33Q99PP7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim33Q99PP7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
Trim33Q99PP7 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim33Q99PP7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim33Q99PP7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim33Q99PP7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim33Q99PP7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.22■□□□□ 0.35
Trim33Q99PP7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.22■□□□□ 0.35
Trim33Q99PP7 Gm29791-202ENSMUST00000207888 369 ntBASIC17.22■□□□□ 0.35
Trim33Q99PP7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trim33Q99PP7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim33Q99PP7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim33Q99PP7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim33Q99PP7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim33Q99PP7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim33Q99PP7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim33Q99PP7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim33Q99PP7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim33Q99PP7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim33Q99PP7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim33Q99PP7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim33Q99PP7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trim33Q99PP7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim33Q99PP7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim33Q99PP7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim33Q99PP7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim33Q99PP7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim33Q99PP7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim33Q99PP7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim33Q99PP7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trim33Q99PP7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim33Q99PP7 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim33Q99PP7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Trim33Q99PP7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim33Q99PP7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trim33Q99PP7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms