Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Trim34aQ99PP6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC21.5■■□□□ 1.03
Trim34aQ99PP6 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.5■■□□□ 1.03
Trim34aQ99PP6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Trim34aQ99PP6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim34aQ99PP6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Trim34aQ99PP6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC21.5■■□□□ 1.03
Trim34aQ99PP6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC21.5■■□□□ 1.03
Trim34aQ99PP6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim34aQ99PP6 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim34aQ99PP6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim34aQ99PP6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim34aQ99PP6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC21.5■■□□□ 1.03
Trim34aQ99PP6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim34aQ99PP6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim34aQ99PP6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Trim34aQ99PP6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim34aQ99PP6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim34aQ99PP6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Trim34aQ99PP6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trim34aQ99PP6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim34aQ99PP6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trim34aQ99PP6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC21.49■■□□□ 1.03
Trim34aQ99PP6 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Trim34aQ99PP6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trim34aQ99PP6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Trim34aQ99PP6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim34aQ99PP6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim34aQ99PP6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC21.49■■□□□ 1.03
Trim34aQ99PP6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim34aQ99PP6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
Trim34aQ99PP6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Trim34aQ99PP6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC21.48■■□□□ 1.03
Trim34aQ99PP6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim34aQ99PP6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim34aQ99PP6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim34aQ99PP6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim34aQ99PP6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC21.48■■□□□ 1.03
Trim34aQ99PP6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Trim34aQ99PP6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim34aQ99PP6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC21.48■■□□□ 1.03
Trim34aQ99PP6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim34aQ99PP6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim34aQ99PP6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Trim34aQ99PP6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Trim34aQ99PP6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim34aQ99PP6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Trim34aQ99PP6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Trim34aQ99PP6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim34aQ99PP6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim34aQ99PP6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC21.47■■□□□ 1.03
Trim34aQ99PP6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim34aQ99PP6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Trim34aQ99PP6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim34aQ99PP6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC21.47■■□□□ 1.03
Trim34aQ99PP6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim34aQ99PP6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.47■■□□□ 1.03
Trim34aQ99PP6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Trim34aQ99PP6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim34aQ99PP6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim34aQ99PP6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim34aQ99PP6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim34aQ99PP6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim34aQ99PP6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim34aQ99PP6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim34aQ99PP6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim34aQ99PP6 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim34aQ99PP6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC21.46■■□□□ 1.03
Trim34aQ99PP6 Gm3272-201ENSMUST00000181181 1229 ntBASIC21.46■■□□□ 1.03
Trim34aQ99PP6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim34aQ99PP6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim34aQ99PP6 Gm10566-201ENSMUST00000086739 996 ntBASIC21.46■■□□□ 1.03
Trim34aQ99PP6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim34aQ99PP6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim34aQ99PP6 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim34aQ99PP6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Trim34aQ99PP6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim34aQ99PP6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.45■■□□□ 1.02
Trim34aQ99PP6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim34aQ99PP6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC21.45■■□□□ 1.02
Trim34aQ99PP6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim34aQ99PP6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC21.45■■□□□ 1.02
Trim34aQ99PP6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim34aQ99PP6 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC21.45■■□□□ 1.02
Trim34aQ99PP6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Trim34aQ99PP6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim34aQ99PP6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim34aQ99PP6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim34aQ99PP6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim34aQ99PP6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim34aQ99PP6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim34aQ99PP6 Gm14464-201ENSMUST00000119658 1254 ntBASIC21.44■■□□□ 1.02
Trim34aQ99PP6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim34aQ99PP6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC21.44■■□□□ 1.02
Trim34aQ99PP6 Mir8112-201ENSMUST00000184382 131 ntBASIC21.44■■□□□ 1.02
Trim34aQ99PP6 Gm17807-201ENSMUST00000186869 298 ntBASIC21.44■■□□□ 1.02
Trim34aQ99PP6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim34aQ99PP6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trim34aQ99PP6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Trim34aQ99PP6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms